CX290212

Overview
NameCX290212
Unique NameCX290212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.688e-47
Identity = 98/233 (42.06%), Postives = 148/233 (63.52%), Query Frame = 1
Query:   16 GYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP--SLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRW 708
            G+ F    ++ ATN F    V+G GG+G VY+G+L +GT+VAVK+      Q   EF+ E+E +   RH++LV L+GYC E    +L+YEY+ +G L+  L+G+     +L+W+ R++I  G+A+ L YLH      V+HRD+K++NIL+D+ F AK++DFGL+K   +  ++H++T V G+FGY+ PEY     L EKSD+YSFGV+L E +  R  +D   P   VN   W
Sbjct:  168 GHWFTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKL-LDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEW 399          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.688e-47
Identity = 99/209 (47.37%), Postives = 137/209 (65.55%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKR-GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 648
            F F  +  AT+ F    ++G GGFG VY+G+  DGT VAVKR  +     G ++F+TE+EM+S   HR+L+ LIGYC   +E +L+Y YM NG++   L     P+L W  R +I IG+ARGL YLH      +IHRDVK+ANILLDE F A V DFGL+K     D +HV+TAV+G+ G++ PEY    Q +EK+DV+ FG++L E++
Sbjct:  287 FTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK--PALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHED-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 492          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.204e-47
Identity = 104/235 (44.26%), Postives = 145/235 (61.70%), Query Frame = 1
Query:   28 PFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG-SGL------PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            PF  ++EAT++F  + +IG G +G+VY G LN+    A+K+ +   Q    EF  ++ M+S+ +H + V L+GYC + N  IL YE+  NG+L   L+G  G+      P LSW QR++I +G+ARGL YLH      +IHRD+KS+N+LL E+ +AK+ADF LS   P++     ST V G+FGY  PEY    QL  KSDVYSFGVVL E+L  R  +D  LPR   +   WA
Sbjct:   62 PFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPD-NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWA 295          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.204e-47
Identity = 97/205 (47.32%), Postives = 134/205 (65.37%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSL--SWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 648
            +++AT NF  + ++G GG G VYKG L DG  VAVK+     +  L EF  E+ +LSQ  HR++V L+G C E    +L+YE++ NG L  HL+     ++  +W  RL I I  A  L YLH+  +  + HRDVKS NI+LDE + AKV+DFG S+T   +D TH++T V G+ GY+DPEYF+  Q T+KSDVYSFGVVL E++
Sbjct:  440 LEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRT-VTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELI 643          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.879e-47
Identity = 98/210 (46.67%), Postives = 141/210 (67.14%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL-PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVI 666
            ++EAT+ +DE+ ++G GG G VYKG L D + VA+K+        + +F  E+ +LSQ  HR++V L+G C E    +L+YE++ +GTL  HL+GS    SL+W+ RL + +  A  L YLH+  +  +IHRD+K+ANILLDEN  AKVADFG S+  P +D+  ++T V+G+ GYLDPEY+    L EKSDVYSFGVVL E+L  +  +
Sbjct:  403 MKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIP-MDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKAL 611          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.879e-47
Identity = 101/223 (45.29%), Postives = 147/223 (65.92%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL-PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVI---DPTLPREMVN 696
            ++EATN + ES ++G GG G VYKG L D + VA+K+    ++  + +F  E+ +LSQ  HR++V ++G C E    +L+YE++ +GTL  HL+GS    SL+W+ RL I    A  L YLH+  +  +IHRD+K+ANILLD+N  AKVADFG S+  P +D+  ++T V+G+ GYLDPEY+    L EKSDVYSFGVVL E+L  +  +    P  P+ +V+
Sbjct:  397 MKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIP-MDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVS 618          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.879e-47
Identity = 100/210 (47.62%), Postives = 140/210 (66.67%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL-PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVI 666
            +++ATN + ES ++G GG G VYKG L D + VA+K+        + +F  E+ +LSQ  HR++V L+G C E    +L+YE++ NGTL  HL+GS +  SL+W+ RL+I I  A  L YLH+  +  +IHRD+K+ANILLD N  AKVADFG S+  P +D+  + T V+G+ GYLDPEY+    L EKSDVYSFGVVL E+L  +  +
Sbjct:  402 MKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIP-MDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKAL 610          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.760e-47
Identity = 99/210 (47.14%), Postives = 140/210 (66.67%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVI 666
            ++EATN +D S ++G GG   VYKG L D + VA+K+        + +F  E+ +LSQ  HR++V L+G C E    +L+YE++  G+L  HL+GS  + SL+W+ RLEI I  A  + YLH+G +  +IHRD+K+ NILLDEN  AKVADFG SK  P +D+  ++T V+G+ GYLDPEY+    L EKSDVYSFGVVL E++  +  +
Sbjct:  101 MKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKP-MDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKAL 309          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.760e-47
Identity = 100/249 (40.16%), Postives = 155/249 (62.25%), Query Frame = 1
Query:    1 ANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHL-YGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTG--PEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            A ++S   + +  +++AT++F +  ++G G +G VY GE  + + VA+KR   +    + +   EI++LS   H +LV L+G C    E  L+YE+M NGTL  HL +  G P LSW+ RL I   +A  + +LH+     + HRD+KS+NILLD  F +K++DFGLS+ G   + + +H+STA +G+ GYLDP+Y +  QL++KSDVYSFGVVL E++    VID T P   VN +  A +   +G++
Sbjct:  292 AENSSVPFYTYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRV 540          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.760e-47
Identity = 101/223 (45.29%), Postives = 140/223 (62.78%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCA-RPVIDPTLPREMVNFS 702
            +++AT+NF+++ VIG GG G VYKG L DG  VAVK+ N   +  L EF  E+ +LSQ  HRH+V L+G C E    IL+YE++ NG L  HL+      +  W  R+ I +  +    YLHT     + HRD+KS NILLDE + AKV+DFG S++   ID TH +T + G+ GY+DPEY+     TEKSDVYSFGVVL E++   +PVI  +  +E+   +
Sbjct:  447 LEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRS-VSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLA 668          
The following BLAST results are available for this feature:
BLAST of CX290212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2296_ARATH1.688e-4742.06Probable receptor-like protein kinase At2g42960 OS... [more]
Y2239_ARATH1.688e-4747.37Probable LRR receptor-like serine/threonine-protei... [more]
Y2706_ARATH2.204e-4744.26Probable receptor-like protein kinase At2g47060 OS... [more]
WAKLH_ARATH2.204e-4747.32Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAK4_ARATH2.879e-4746.67Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
WAK2_ARATH2.879e-4745.29Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
WAK1_ARATH2.879e-4747.62Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAKLS_ARATH3.760e-4747.14Putative wall-associated receptor kinase-like 16 O... [more]
WAKLR_ARATH3.760e-4740.16Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLL_ARATH3.760e-4745.29Putative wall-associated receptor kinase-like 13 O... [more]

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Properties
Property NameValue
Genbank descriptionC02021G02SK IF1 Citrus clementina cDNA clone C02021G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290212 ID=CX290212; Name=CX290212; organism=Citrus clementina; type=EST; length=758bp
GCCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGC
CACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGA
AGGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGG
GGAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGA
GATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATT
GTGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGG
ACCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAA
GCAGAGACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTC
ACACTGGCTATGCCAAAGCAGTTATTCACCGTGATGTAAAGTCTGCAAAT
ATCTTACTTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGATTGTC
CAAGACAGGACCTGAAATTGATCAAACCCATGTGAGTACTGCAGTGAAAG
GAAGTTTTGGGTATCTTGATCCTGAATACTTCAGAAGGCAGCAACTAACT
GAAAAGTCAGATGTTTATTCATTCGGAGTGGTTTTGTTTGAAGTCCTTTG
TGCCAGACCTGTTATAGATCCAACTCTTCCGAGGGAAATGGTGAACTTTA
GCCGATGGGCCCATGAATGGCAGAATAAGGGGCAGCTGGATCAATCATCG
ACCTACTC
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