CX290217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 55/103 (53.40%), Postives = 76/103 (73.79%), Query Frame = 1 Query: 97 RKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 RKG W+ EED L ++I ++G W ++ AGL+R GKSCRLRW+NYLRP +KR I+ EE+ I+ H+ GN+WS+IAK LPGRTDNEIKN+W + ++K+ Sbjct: 11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 94 VRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 +RKG WT EED +L I +GEG W+ + AGL R KSCRLRWLNYL+P +KRG ++ +E L++ LH GNRWS IA LPGRT N++KN+W T + K+ Sbjct: 8 LRKGAWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28 Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 94 VRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 +RKG WT EED +L I +GEG W+ + AGL R KSCRLRWLNYL+P +KRG + +E L++ LH GNRWS IA LPGRT N++KN+W T + K+ Sbjct: 8 LRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.345e-27 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 94 VRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 +RKG WT EED++L I +GEG W+ + GL R KSCRLRWLNYL+P +KRG + +E L++ LH GNRWS IA LPGRT N++KN+W T + K+ Sbjct: 8 LRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 94 VRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 +RKG WT EED +L I +GEG W+ + AGL R KSCRLRWLNYL+P +KRG ++ +E L++ LH GNRWS IA LPGRT N++KN+W T + K+ Sbjct: 8 LRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24 Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 100 KGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTR 393 K W EED IL +Y+ +G+ W + K GL SCR RW+N+L+P +K+G T EE+ +++LHA GN+WS++A+ PGRTDNEIKNFW R Sbjct: 18 KSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNAR 115
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 91 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLK-RTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 E+ KGPWT EED +I ++ +G W+ +AK LK R GK CR RW N+L P+VK+ + T EE +I + H + GNRW++IAK LPGRTDN +KN W + ++++++Q Sbjct: 18 ELNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKH--LKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVEQ 124
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23 Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 91 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLK-RTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 E+ KGPWT EED +I + +G W+ +AK LK R GK CR RW N+L PDVK+ + T EE +I H + GNRW++IAK LPGRTDN IKN W + ++++++Q Sbjct: 83 ELVKGPWTKEEDQRVIELVHKYGPKKWSIIAKH--LKGRIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNSTMKRKVEQ 189
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 91 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLK-RTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 E+ KGPWT EED +I + +G W+ +AK LK R GK CR RW N+L P+VK+ + T EE +I E H + GNRW++IAK LPGRTDN IKN W + ++++++Q Sbjct: 84 ELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKH--LKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 91 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLK-RTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 E+ KGPWT EED +I + +G W+ +AK LK R GK CR RW N+L P+VK+ + T EE +I E H + GNRW++IAK LPGRTDN IKN W + ++++++Q Sbjct: 84 ELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKH--LKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190 The following BLAST results are available for this feature:
BLAST of CX290217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290217 ID=CX290217; Name=CX290217; organism=Citrus clementina; type=EST; length=717bpback to top |