CX290217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 46/112 (41.07%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 79 SQEAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 ++++ + KG WT EED +LI + +G W+ +A+ R GK CR RW N+LRPD+K+ + EE +++E H + GN+W++IAK LPGRT+N IKN W ++Q + Sbjct: 210 TKKSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHIAQVLP-GRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQFSK 320
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21 Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 91 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 E+ KGPWT +ED ++I + N G W +A+ R GK CR RW N+L P++K+ T +E +I + H + GN+W+KIAK LPGRTDN IKN W + ++++ Sbjct: 133 ELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK 236
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 100 KGPWTMEEDLILINYIANHGEGVWNSLA-KAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQI 408 KGPW EED L+ + G W+S+A K G R GK CR RW N+L P+V++ N TPEE +I++ HA GN+W+ I+K L GR N IKN W + + K+I Sbjct: 277 KGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPG--RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKI 378
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 41/106 (38.68%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 91 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQI 408 E+ KGPW+ EED +I+ + +G W+++++ R GK CR RW N+L P + + T EE+L ++ H +GN+W+++ K LPGR+DN IKN W + ++K++ Sbjct: 84 ELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLP-GRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKL 188
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 109 WTMEEDLILINYIANHGEGVWNSLAKAAG--LKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 W EED IL+ Y+ +G W+ +++ L R KSC RW NYLRP +K+G++T +EQ L++ L AK GN+W KIA +PGRT + +W +KQ ++ Sbjct: 12 WRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 115
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 109 WTMEEDLILINYIANHGEGVWNSLAKA--AGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 W EED +L Y+ +G W+ +++ L R KSC RW NYLRP +K+G++T EEQ L++ L AK GN+W KIA +PGRT + +W +KQ ++ Sbjct: 7 WRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 110
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 76 NSQEAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQAE 420 +S KG WT EED L + + HG W +A L R G+ CR RW N L P +KR T EE +I++ H+K+GN+W++I+K LPGRT+ IKN W + +++++ + + Sbjct: 749 SSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLLCL-RNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSKKQ 862
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 100 KGPWTMEEDLILINYIANHGEGVWNSLAKAAGLK-RTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQK 402 KG WT +ED +I + +G W+ +A LK R GK CR RW N+L P++K+ + EE +I + HA GN+W++IAK LPGRTDN IKN W + +++ Sbjct: 201 KGAWTKDEDDKVIELVKTYGPKKWSDIA--LHLKGRMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 100 KGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQ 405 KGPW+ EED L + +G W ++K+ R+GKSCRLRW N L P V+ + EE I HA++GN+W+ IA+ L GRTDN +KN W + ++++ Sbjct: 6 KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106
BLAST of CX290217 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 109 WTMEEDLILINYIANHGEGVWNSLAKAAG--LKRTGKSCRLRWLNYLRPDVKRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQIKQ 414 W+ EED +L Y+ G W+ +++ L R KSC RW NYL+P +K+G++T EEQ L++ L K GN+W KIA +PGRT + +W +KQ ++ Sbjct: 7 WSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 110 The following BLAST results are available for this feature:
BLAST of CX290217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290217 ID=CX290217; Name=CX290217; organism=Citrus clementina; type=EST; length=717bpback to top |