CX290233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.501e-46 Identity = 102/199 (51.26%), Postives = 131/199 (65.83%), Query Frame = 3 Query: 60 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYK-ETSGQETVKLAIRALLEVVE 653 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ + VVL VEK+ +L + KI +D+HIA A +G+ ADARVLVNRAR+E Q HRLT +P + I + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + AWKA A G N+ E+ YK + S +E +KLAI AL + +E Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNE---KPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTME 203
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.267e-46 Identity = 97/198 (48.99%), Postives = 134/198 (67.68%), Query Frame = 3 Query: 66 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYK-ETSGQETVKLAIRALLEVVES 656 YDRAITVFSPDG LFQVEYA EAV++G A+G++ + V+L +K+ KL ++ + KI +D HI A +GL ADARVL++RARIE Q +RLT ++P+TV+ + + I +Q+YTQ GGVRPFG+S LI G D VP LY+TDPSG +KA A G N++ EF EK Y+ + S + + L + A+ +ES Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDE---VPKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIES 202
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.621e-45 Identity = 101/199 (50.75%), Postives = 129/199 (64.82%), Query Frame = 3 Query: 60 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYK-ETSGQETVKLAIRALLEVVE 653 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ D VVL VEK+ +L + KI +D+HIA A +G+ ADARVLVNRAR+E Q HRLT +P + I + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + AWKA A G N+ E Y+ + + E +KLAI AL + +E Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN---DKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTME 203
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.717e-45 Identity = 98/199 (49.25%), Postives = 133/199 (66.83%), Query Frame = 3 Query: 60 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYK-ETSGQETVKLAIRALLEVVE 653 A YDRAITVFSPDG LFQV+YA EAV++G AVGV+ D VVL VEK+ KL + KI +D+HIA A +G+ ADARVLV+RAR+E Q +RLT +PV + + + I L+Q +TQ GGVRPFG + L+ G + P L++TDPSG + WKA A G N+ E+ Y+ E + +E +KLA+ AL +++E Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNE---KPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAVLALSKIME 203
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.717e-45 Identity = 98/200 (49.00%), Postives = 131/200 (65.50%), Query Frame = 3 Query: 60 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSG-QETVKLAIRALLEVVES 656 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ + VVL VEK+ +L + KI +D+HIA A +G+ ADARVLVNRAR+E Q +RLT +P V I + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + AWKA A G N+ E+ Y++ ++ +KLA+ AL + +E+ Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR---PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMEN 204
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.161e-45 Identity = 97/194 (50.00%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 66 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLE 644 YDRAITVFSPDG LFQVEYA EAV++G A+G++ + VVLGV+K+ KL + + K+ +D HI A AGL ADARVLV RARIE Q++R T +P+ V+ + + I L+Q YTQ GGVRPFG + LI G D T L++TDPSG + KA A G + E+ Y+E + QE ++LA+RAL E Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVD--TKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYE 201
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.051e-44 Identity = 90/201 (44.78%), Postives = 135/201 (67.16%), Query Frame = 3 Query: 66 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLEVVESGGK 665 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ VV+ EK+ A L D + K+ +D+H+ + AGL +D RVL++ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP L+ T+PSG + ++A A G+ + EFLEKNYKE + +ET+ LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEK 208
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44 Identity = 90/201 (44.78%), Postives = 135/201 (67.16%), Query Frame = 3 Query: 66 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLEVVESGGK 665 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ VV+ EK+ A L D + K+ +D+H+ + AGL +D RVL++ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++T+ LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44 Identity = 90/201 (44.78%), Postives = 135/201 (67.16%), Query Frame = 3 Query: 66 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLEVVESGGK 665 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ VV+ EK+ A L D + K+ +D+H+ + AGL +D RVL++ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++T+ LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of CX290233 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.793e-44 Identity = 90/201 (44.78%), Postives = 135/201 (67.16%), Query Frame = 3 Query: 66 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAVKLQDSRMVRKIVSLDNHIALACAGLKADARVLVNRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE-TSGQETVKLAIRALLEVVESGGK 665 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ VV+ EK+ A L D + K+ +D+H+ + AGL +D RVL++ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++T+ LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208 The following BLAST results are available for this feature:
BLAST of CX290233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290233 ID=CX290233; Name=CX290233; organism=Citrus clementina; type=EST; length=667bpback to top |