CX290234

Overview
NameCX290234
Unique NameCX290234
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length575
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_CRYNE (Protein phosphatase methylesterase 1 OS=Cryptococcus neoformans GN=PPE1 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.618e-35
Identity = 85/203 (41.87%), Postives = 128/203 (63.05%), Query Frame = 1
Query:   16 VAMDLRGHGKSSSEN---DIDLSIETMCNDVLAVLKEMYGE--QPPSIVLVGHSMGGSVAVHVAAK--KTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSI-------PSTLKYDDSKK---CYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            +A D RGHGK+S+ +   ++DLS +T+ +D +A+++ M+ +  + PS++L+GHSMG +  V  A +  K   ++ G+VV+DVVEGTA+ SL  M+ +LS R + F S+  AI W V   S+RN++SAR+S+       PS+   D S       V+R  L  TE YW  WY+GLS++FL     +LL+LAG +RLDR L  GQ
Sbjct:  154 LAFDCRGHGKTSTSDPNLELDLSHDTLLSDFMAIIEMMFPDPKESPSLILLGHSMGAAPVVSAAPELQKKGYTIPGVVVLDVVEGTAVESLPLMKSVLSKRPESFRSVIDAIYWHVTSNSIRNVESARVSVPHIIVPAPSSSSSDPSANPGGKQVWRTNLVGTEPYWEGWYKGLSQRFLRTKCARLLVLAGQERLDRELMVGQ 356          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_GIBZE (Protein phosphatase methylesterase 1 OS=Gibberella zeae GN=PPE1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.063e-33
Identity = 82/196 (41.84%), Postives = 121/196 (61.73%), Query Frame = 1
Query:   16 VAMDLRGHGKSSSEND--IDLSIETMCNDVLAVLK----EMYGEQPPSIVLVGHSMGGSVAVHVAAKKTL-RSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKY---DDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            +A+D RGHG + +  D   D+ ++T+ +D+  V++    EM   + P IVLVGHS+GG+V   +A    L  S+ G  V+DVVEG+A+ +L  M   LSTR   F++++  IEW ++  ++RN  SAR S+P+ L +   DD  + + +R  L  T+ YW  W+ GLS+KFL     K+LLLAGTDRLD  LT GQ
Sbjct:  148 LALDCRGHGSTYAPEDKAFDMRLDTLSSDLYNVVQLTKTEMSWPEMPPIVLVGHSLGGAVVTDLAKSGKLGTSVLGYAVLDVVEGSAIDALQSMHTYLSTRPLGFATLQAGIEWHIRSRTIRNSISARTSVPALLVFNENDDPTRPWRWRTNLGATQPYWEDWFVGLSKKFLEARGGKMLLLAGTDRLDTELTIGQ 343          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_NEUCR (Protein phosphatase methylesterase 1 OS=Neurospora crassa GN=ppe-1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.182e-30
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 1
Query:   16 VAMDLRGHGKSS--------SEND---------IDLSIETMCNDVLAVLK----EMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLR-SLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLK-------------------YDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            +++D RGHG ++         E D         +DLS+ T+ +D+  V++     M+  + P I+LVGHS+GG+V   +A    L  SL G  V+DVVEG AM +L  MQ  LSTR Q F+S++  I+W V+  ++RN  SAR S+P  L                       + K + ++  L  T+ +W  W+ GLS+KFL     K+LLLAGTDRLD  LT GQ
Sbjct:  171 LSLDARGHGSTTVTAASSVPGEGDETTGQAPPPLDLSLSTLASDLFTVIQLTRTAMHWPELPPIILVGHSLGGAVVTELAKSYRLGPSLLGYAVLDVVEGCAMDALQSMQTYLSTRPQGFASLKDGIDWHVRSRTIRNSTSARTSVPGLLAPVEELQRPELQQLPRGVAGTQGTAKPWRWKTDLAATQPFWEDWFVGLSKKFLEARGGKMLLLAGTDRLDTELTIGQ 397          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_DICDI (Probable protein phosphatase methylesterase 1 OS=Dictyostelium discoideum GN=ppme1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.623e-29
Identity = 72/200 (36.00%), Postives = 115/200 (57.50%), Query Frame = 1
Query:   25 DLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYG-----------------EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            D RGHG++ + +D +LSIETM +D   ++                      ++   +++VGHSMGGSV +  ++   + +L GL+V+DVVEGTA+ +L  M+ IL+ R + F S++ AI+WS+   +++N++SAR+S+     Y  +   + +             W+ GLS++FLS    KLL+LAGTDRLDR LT  Q
Sbjct:  108 DCRGHGETKTSDDSNLSIETMVDDCANLINYYQDIIYKNEGGGGGNDDDDQKERLKVIIVGHSMGGSVVIKTSSTNRINNLFGLIVIDVVEGTALLALSSMKSILAKRPKSFDSVKDAIKWSISSNTVKNIESARVSL-----YFINNFFFFFLTD----------WFSGLSKEFLSSMALKLLILAGTDRLDRELTIAQ 292          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_DEBHA (Protein phosphatase methylesterase 1 OS=Debaryomyces hansenii GN=PPE1 PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 8.161e-26
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 1
Query:   25 DLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQP--PSIVLVGHSMGGSVAVH--VAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSL-RNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSC----PVPKLLLLAGTDRLDRPLTFGQ 573
            D+RGHG SS+    D S+ T+ ND   ++ E + +     SI L+GHS+GGSV     VA         GL+V+D+VE TA+ +L  M + +  R   F   ++AI+W +K   L  + +SA +S+P  L+  +     +++  L+ETE +W  W+ GLSE F++C     + KLL+L+G + LD  L  GQ
Sbjct:  139 DMRGHGDSSTTIPPDYSLATITNDCEFIIDEFHAKHALRSSIYLLGHSLGGSVLTSYLVANPDNAYKFKGLIVLDIVEETAIKALSAMPQFVRKRPTTFGDYQEAIDWHIKESHLLHSEESALVSVPDLLR--ECPNGLIWKTNLQETEPFWETWFTGLSENFINCGKTQHIAKLLVLSGHETLDTNLIIGQ 328          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_CANAL (Protein phosphatase methylesterase 1 OS=Candida albicans GN=PPE1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.976e-24
Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 1
Query:   25 DLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            D RGHG+S + +D   S++T+  DV  VL++   + Q  SI L+GHS+GG+V    +       L GL+++D+VE  A+ SL  M   ++ R   F S+ KAI W +    L N  SARLS+P    + D      +   L  T+ YW+ W+ GLSE FL    PKLL+L+  + LD+ L  GQ
Sbjct:  123 DTRGHGESVATSDF--SLDTLVQDVSFVLEQFSSKHQQTSIFLLGHSLGGAVLAKYSTLYPSDILKGLILLDIVEEAAVQSLNAMPSFIARRPLSFPSLSKAISWHM-NFLLFNEKSARLSVPDL--FTDK---LTWITDLNATQPYWQTWFSGLSENFLGFKGPKLLMLSTHESLDKQLMIGQ 298          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_ASHGO (Protein phosphatase methylesterase 1 OS=Ashbya gossypii GN=PPE1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.593e-21
Identity = 67/199 (33.67%), Postives = 109/199 (54.77%), Query Frame = 1
Query:   19 AMDLRGHGKS---SSENDIDLSIETMCNDVLAVLKEMYG--------EQPPSIVLVGHSMGGSVAVHV--AAKKTLRS-LHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            + D RGHG++    S  ++   + T   D  AV+K +          ++  SIVL+GHS+GGS+      A +  LRS + G+ + D+VE  A+A+L +M   L+T    F+++ +AIE+ ++ G      SA + +P+ L +  S+   V    L   ++YW  W+ GLS +F+  P  KLL+LAG+D LD+ L  GQ
Sbjct:  137 SFDARGHGETVPLDSTLEVPYDLATFTADFNAVIKTLQQRILQHKIPKEKLSIVLLGHSLGGSICTTAFNAMESALRSKVVGVAIFDIVEEAAIAALNNMSHHLATTPTSFATMREAIEYYIEKGLSNLRSSAEVCVPA-LFHKTSRGKAVRITDLASFQKYWHTWFVGLSSRFVHLPTSKLLVLAGSDNLDKELIIGQ 334          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_CANGA (Protein phosphatase methylesterase 1 OS=Candida glabrata GN=PPE1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.124e-20
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  139 SIVLVGHSMGGSVAVHVAAKKTL---RSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            SI+ +GHS+GGS+     +K ++   + + G+ + D+VE  A  +L  +   L      FS  E+AI+W V     R  +SA ++IP+  K  +S K  V    LE    +WR W+  LS+ F+S P  KLL+LAG D LDR L  GQ
Sbjct:  187 SIIFIGHSLGGSICTFTYSKLSIELKKQVIGVAMFDIVEEAATLALEKVNHFLQVTPNMFSGYEEAIDWHVSHELSRLRESADIAIPALFKSTESGKV-VRITNLETFRPFWRTWFSDLSKSFVSLPTCKLLILAGNDNLDRELIIGQ 333          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_KLULA (Protein phosphatase methylesterase 1 OS=Kluyveromyces lactis GN=PPE1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20
Identity = 62/197 (31.47%), Postives = 97/197 (49.24%), Query Frame = 1
Query:   19 AMDLRGHGKSS--SENDIDLSIETMCNDVLAVLKEMYG-------EQPPSIVLVGHSMGGSVAVHV---AAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            + D RGHG++      D+   +     D + ++   Y        +   S++LVGHS+GGSV  ++     +   R   GL ++D+VE  A   L  +   LS     F S ++A++W       +  +SA +S+P+      S K  V    L   + YW +W++GLS KF+S P  KLL+LAG D LD+ L  GQ
Sbjct:  138 SFDARGHGETKPLDPTDVTYYLNDFVTDFVELIVWFYENYLKACKQSKLSLILVGHSLGGSVCANLYEHLPEYIKRHTTGLAMLDIVEEMAKFVLTKVDHFLSVTPNVFGSAKEAVDWYQSHNYSKLKESAEISVPALFHKAKSGKV-VRITNLASFKPYWDSWFDGLSAKFVSLPTSKLLILAGNDNLDKELIVGQ 333          
BLAST of CX290234 vs. ExPASy Swiss-Prot
Match: PPME1_YEAST (Protein phosphatase methylesterase 1 OS=Saccharomyces cerevisiae GN=PPE1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.672e-18
Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   19 AMDLRGHGKSS---SENDIDLSIETMCNDVLAVL----KEMYGEQP---PSIVLVGHSMGGSVAVHVAAKKTL---RSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTFGQ 573
            A D RGH ++    ++  I    ++   D +++L    K    ++P    S++L+GHS+GGS+      K +    + + G+ ++D+VE  A+ +L  ++  L      F SI  A++W V+    R   SA ++IP+      S K  V    L+    +W  W+  LS  F+  PV KLL+LAG + LD+ L  GQ
Sbjct:  148 AFDARGHAETKFKKADAPICFDRDSFIKDFVSLLNYWFKSKISQEPLQKVSVILIGHSLGGSICTFAYPKLSTELQKKILGITMLDIVEEAAIMALNKVEHFLQNTPNVFESINDAVDWHVQHALSRLRSSAEIAIPALFAPLKSGKV-VRITNLKTFSPFWDTWFTDLSHSFVGLPVSKLLILAGNENLDKELIVGQ 344          
The following BLAST results are available for this feature:
BLAST of CX290234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PPME1_CRYNE9.618e-3541.87Protein phosphatase methylesterase 1 OS=Cryptococc... [more]
PPME1_GIBZE1.063e-3341.84Protein phosphatase methylesterase 1 OS=Gibberella... [more]
PPME1_NEUCR4.182e-3037.00Protein phosphatase methylesterase 1 OS=Neurospora... [more]
PPME1_DICDI4.623e-2936.00Probable protein phosphatase methylesterase 1 OS=D... [more]
PPME1_DEBHA8.161e-2635.94Protein phosphatase methylesterase 1 OS=Debaryomyc... [more]
PPME1_CANAL9.976e-2438.04Protein phosphatase methylesterase 1 OS=Candida al... [more]
PPME1_ASHGO1.593e-2133.67Protein phosphatase methylesterase 1 OS=Ashbya gos... [more]
PPME1_CANGA5.124e-2037.16Protein phosphatase methylesterase 1 OS=Candida gl... [more]
PPME1_KLULA6.692e-2031.47Protein phosphatase methylesterase 1 OS=Kluyveromy... [more]
PPME1_YEAST3.672e-1829.80Protein phosphatase methylesterase 1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionC02022A01SK IF1 Citrus clementina cDNA clone C02022A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290234 ID=CX290234; Name=CX290234; organism=Citrus clementina; type=EST; length=575bp
CGATTCGGCACGAGGGTTGCTATGGACCTGAGAGGACATGGAAAATCATC
CTCAGAAAATGATATTGACCTTTCTATTGAGACTATGTGCAATGATGTTT
TAGCTGTTTTAAAGGAAATGTATGGTGAACAACCTCCTTCAATTGTGCTT
GTTGGCCACAGCATGGGAGGTTCAGTTGCTGTGCATGTTGCTGCAAAGAA
GACATTACGATCATTGCATGGGCTGGTTGTTGTTGATGTTGTAGAGGGAA
CAGCTATGGCTTCATTGATTCATATGCAAAAAATTCTATCAACCAGAATG
CAGCATTTCTCAAGCATTGAAAAAGCGATTGAATGGAGTGTGAAAGGAGG
TTCTTTAAGAAATCTTGACTCTGCTCGTCTCTCTATCCCTTCAACATTAA
AGTATGATGATTCAAAGAAGTGTTATGTCTACCGAGCACGATTAGAAGAA
ACTGAACAATATTGGAGAGCCTGGTATGAAGGTCTTTCAGAGAAATTTCT
GTCATGTCCTGTCCCAAAGCTCTTGCTTCTAGCAGGAACAGACAGACTCG
ATAGACCTCTTACATTTGGGCAAAT
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