CX290243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.785e-33 Identity = 80/243 (32.92%), Postives = 139/243 (57.20%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKH-ENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSV-------------SAEIDYQRENH-----------------HDYAYHVQPIQPNLQE 642 GRGKIEIKRIEN++NRQVT+SKRR G+LKKA E+ VLCDA+V ++I++S+GKM +YCSP+ SL +++EQY + + H + + E+ R+K E ++++ +R G+D+SSL ++ LE LE + +R ++ +++++ +R+ +++E+++ +L ++ + + A E+ + SA Y E+ D + +QP QPNLQ+ Sbjct: 2 GRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQAALTGEVKLGEMAPLAMLQPPPAFAHSATAYYGGESSSSGTALQLMSAAPQLHADDLGFRLQPTQPNLQD 244
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33 Identity = 66/184 (35.87%), Postives = 124/184 (67.39%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWD--PKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAME 552 GRGKIEIK+IEN + RQVT+SKRR G++KK +E+++LCDA + LI+++++GK+ ++CS + ++++Y +G RL D E L +E+E ++RE ++++LR +G D++S+ P EL LE LE+ ++ +R++++E ++E + + +M+EE++N + L + A + Q+ ++ Sbjct: 2 GRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAMEFQQAGID 185
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32 Identity = 81/209 (38.76%), Postives = 131/209 (62.68%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHEN---LSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQPI 624 GRGKIE+KRIEN ++RQVT+SKRR G+LKK E++VLCDA++ LII++S GK+ +YCS S+ I+ +Y + +G L P +N L +E+ +++R+ +Q+ L+ G+D+S +EL LE LE+ L IR ++ E +ME ++K KM+E+E++ + L ++ +Q+ SA +D+ E+HH + H Q I Sbjct: 5 GRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASL--PVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQMYKQE---------SAAMDH--EDHHHHHEHQQAI 200
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.279e-31 Identity = 80/241 (33.20%), Postives = 138/241 (57.26%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSG-------RRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQ-------QQELAME-------NSVSAEIDYQRENHH--------DYAYHVQPIQPNLQE 642 GRGKIE+KRIEN ++RQVT+SKRR+G++KK E++VLCDA++ LI++++ GK+ +YC+P S+ I+++Y + G R ++ + E+ R+K E +Q+ L+ G+D+S++ +EL LE L+ L +R ++ E+ME +++ M+E+E+ + L +I RQ QQ++ E + E + E+ H ++Y +QP QPNLQ+ Sbjct: 2 GRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMSNQIQRQAEVEHHHQQQVMTELKLVEQQQPLMNEFPFFGEDLHLGTLPLLDTHSYRLQPTQPNLQD 242
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.671e-31 Identity = 67/172 (38.95%), Postives = 115/172 (66.86%), Query Frame = 1 Query: 22 RGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHN--YLKFVLRQQE 519 RGKI+IKRIEN +NRQVTYSKRRNG+ KKA E++VLCDAKVS+I+ +S+ K+H+Y SP+T+ + +QY + G LW +E + ++++ N ++ ++R GE ++ L ++++ L + ++N L IR+++ S +++T +K + +EE H L+F R+++ Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNLVLEFDARRED 174
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.862e-31 Identity = 75/239 (31.38%), Postives = 137/239 (57.32%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKH-ENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYLKFVLRQQ---------EIARQQQELAMENSVSAEIDYQRENHHDYA-----------------YHVQPIQPNLQE 642 GRGKIEIKRIENA+NRQVT+SKRR G+LKKA E+ VLCDA+V ++I++S+GKM +YCSP+ SL +++E Y + + H + + E+ R++ E +++ +R G+D+S+L ++ LE LE + +R ++ +++++ +R+ ++E+++++L ++ + ++ + + + ++A Y E A + +QP QPNLQ+ Sbjct: 2 GRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKAMVEMAPVLSMLTAAPAYYGEESSSTALQLTPPLHAVDAAAAAGFRLQPTQPNLQD 240
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.083e-30 Identity = 78/182 (42.86%), Postives = 114/182 (62.64%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRR-----LWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM-----ETMRKNGKMMEEEHNYLKFVLRQQEIARQQ 534 GRGK+++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V+LII+++ GK+++Y + S + ILE+Y R S N +E ++K + + +Q +HL GED+ SLN KEL LE LEN L IR ++S+ M E RK + EE K ++ +Q++ +QQ Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDS-CMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQ 182
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.847e-30 Identity = 78/182 (42.86%), Postives = 113/182 (62.09%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRR-----LWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM-----ETMRKNGKMMEEEHNYLKFVLRQQEIARQQ 534 GRGK+++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V+LII+++ GK++ Y + S + ILE+Y R S N +E ++K + + +Q +HL GED+ SLN KEL LE LEN L IR ++S+ M E RK + EE K ++ +Q++ +QQ Sbjct: 2 GRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDS-CMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQ 182
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.847e-30 Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKME----TMRKNGKMMEEEHNYL 495 GRGK+EI++IEN +NRQVT+SKRRNGI+KKA+E+TVLCDAKVSL++ +S+ K+H Y SP SL + ++Y + G LW + E + + ++ N ++ ++ G D+ L EL AL+ +E ++ IR+K+ ++ T RK K +EE H L Sbjct: 2 GRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDL 164
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.151e-30 Identity = 72/216 (33.33%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 22 RGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAM---------------ENSVSAEIDYQRENHHDYAYH 612 RGKI+IKRIEN +NRQVTYSKRRNG+ KKA E+TVLCDA+VS+I+++SS K+H+Y SP+T+ +I++ Y S +W ++E + ++ N ++ +++ GE + L+ +EL LED +EN +R+++ ++ET +K K + + K ++ + E+ + + E S + + + + +HH Y H Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNK---SQQDIQKNLIHELELRAEDPHYGLVDNGGDYDSVLGYQIEGSRAYALRFHQNHHHYYPNH 215 The following BLAST results are available for this feature:
BLAST of CX290243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290243 ID=CX290243; Name=CX290243; organism=Citrus clementina; type=EST; length=750bpback to top |