CX290243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27 Identity = 65/167 (38.92%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYH---RQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNP-KELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYL 495 G+GKIE+KRIE+A+ RQVT+SKRR G LKKA E+ VLCDA+V +++++ GK+ D+CSP L+++ +Y R + + + E + EI R++ E D+++ LR GED+SS++ EL L+ LE+ L + ++ S+++E MR+ + + E++N+L Sbjct: 2 GQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27 Identity = 70/193 (36.27%), Postives = 114/193 (59.07%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDP------KHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSA 567 GRGKIEIKRIEN ++RQVT+ KRRNG+LKKA E+ +LCDA+++LI+++S G+++++ S S +E+Y + S H+ E +++ + +Q RHL GE I ++ KEL +LE+ LE G+ IR K+ E ++E M+K ++ E+ +L+ + + E A + A E+ A Sbjct: 2 GRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEF-SNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQAAEDDEMA 193
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27 Identity = 75/212 (35.38%), Postives = 125/212 (58.96%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDP-----KHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYLKFVLRQQE--IARQQQELAMENSVSAEIDYQRENHHDYAYHV 615 GRG++E+KRIEN NRQVT+SKRR G+LKKA+EI+VLCDA+VSLI+++ GK+ +Y S S + +LE+Y R S R+L P N S E R+K + + ++ RH GE++ ++ K+L LE LE L IR ++ +E + +++ K ++EE++ L ++++E + +Q + N ++ + H + Y + Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSES-CMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMI 212
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27 Identity = 77/222 (34.68%), Postives = 127/222 (57.21%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENL------------SNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHH-DYAYHVQPIQPN 633 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS S+S++ LE+Y + + + P N+ E ++K D +Q R+L GED+ L+ KEL LE L++ L IR ++ +++ ++ +M+ E + L+ LA + +++ +E+HH DY H Q Q N Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMIRTLERYQKCN----YGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRL------------RLADGYQMPLQLNPNQEDHHVDYGRHDQQQQQN 206
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27 Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPK---HENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQE 519 GRG ++++RIEN NRQVT+SKRRNG+LKKA EI+VLCDA V+LI++++ GK++++ S S S+ ILE+Y R S R + +P EN +E +K + D +Q R L GE + +L KEL LE LE L IR K++ E + ++K K ++ ++N L+ ++ ++ Sbjct: 2 GRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS-SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEK 176
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27 Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPK---HENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQE 519 GRG ++++RIEN NRQVT+SKRRNG+LKKA EI+VLCDA V+LI++++ GK++++ S S S+ ILE+Y R S R + +P EN +E +K + D +Q R L GE + +L KEL LE LE L IR K++ E + ++K K ++ ++N L+ ++ ++ Sbjct: 2 GRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS-SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEK 176
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27 Identity = 73/206 (35.44%), Postives = 128/206 (62.14%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRR--LWDPKHE--NLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHN--YLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYA 606 GRGKI I+RI+N+++RQVT+SKRRNGI KKAKE+ +LCDA+V L+I++S+G++++Y STS+ ++++Y + + + +P E E ++++ +Q R L GED+S LN KEL +LE+ LE L S+R K+ +++ + + G ++ +E+ Y K L +QE A +++ E +E++ +++A Sbjct: 2 GRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY--SSTSMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAELYKKI-YETEGPSEVNRDSPTPYNFA 204
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 78/226 (34.51%), Postives = 129/226 (57.08%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR------QSGRRLWDPKHENLSNEIE--RIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEID---------YQRENHHDYAYHVQPI--QPNLQ 639 GRG++E+KR+EN NRQVT++KRRNG+LKKA E++VLCDA+V+LI++++ GK++++CS S S++ LE+Y + + + LS++ E ++K + +Q R+L GED+ L+ K+L LE L++ L IR +++ M + + G + +EH + RQ+ E NS+ + +Q H D + VQPI +P LQ Sbjct: 2 GRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTS-SMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFM--LDQLGDLQRKEH----LLCEANRALRQRMEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQ 220
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 71/204 (34.80%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 16 GGRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHD 600 G RGKIEIKRIEN +NRQVT+ KRR+G+LKKA E++VLCDA+V+L++++S G++++Y + S+ + +E+Y + + + + ++ E ++K++ +Q R L G++I+++N +EL LE L+ GL IR +++E ++E M++ ++ ++ YLK + + E R Q + M S S Q H+D Sbjct: 43 GSRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY--SNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESE--RGLQTVNMMGSASTSEYVQNMIHYD 242
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 72/183 (39.34%), Postives = 118/183 (64.48%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR--QSGRRLWD---PKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQE 540 GRG++++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V+LI+++S GK+ +Y S + + ILE+Y R S ++L + EN E ++K + ++ R+ GED+ SL+ KEL +LE L+ + SIR +++ E + ++K K +++ +N L ++++E QQE Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY-STDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQE 183 The following BLAST results are available for this feature:
BLAST of CX290243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290243 ID=CX290243; Name=CX290243; organism=Citrus clementina; type=EST; length=750bpback to top |