CX290243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 9.488e-27 Identity = 74/216 (34.26%), Postives = 125/216 (57.87%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR------QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQR---ENHHDYAYHVQPIQPNLQ 639 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS S+S++ LE+Y + ++ + + E ++K + +Q R+L GED+ LN KEL +LE L+ L IR +++ M ++ + E N L+Q+ + L + + + ++ Y R + D +H +P LQ Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLNLQWQQN-AQDVGYGRQATQTQGDGFFHPLECEPTLQ 215
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26 Identity = 70/184 (38.04%), Postives = 117/184 (63.59%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS----GRRLWDPKHENLS---NEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQ 537 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS + S+ LE+Y + S + + + E L NE ++K + +Q R+L GED+ SL KEL +LE L++ L +R ++ +++ +++ +M+ E + L+ L + R QQ Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-TQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQ 184
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26 Identity = 70/184 (38.04%), Postives = 117/184 (63.59%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS----GRRLWDPKHENLS---NEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQ 537 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS + S+ LE+Y + S + + + E L NE ++K + +Q R+L GED+ SL KEL +LE L++ L +R ++ +++ +++ +M+ E + L+ L + R QQ Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-TQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQ 184
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26 Identity = 77/215 (35.81%), Postives = 127/215 (59.07%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLS----NEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIA-RQQQELAMENSVSAEIDYQRENHHDYAYHVQPIQPNL 636 GRG++E+KRIEN NRQVT+SKRRNG+LKKA E++VLCDA+V+LII++S GK++++ S + +E+Y+R L + K E + E+ ++K + + + R+L GED+ + KEL ALE LE L + R +++ E+ME +RK + + + + LK + A + Q+L ++ S D ++ + V+P PN+ Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF--GSVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASVAGD-----PNNSEFPVEPSHPNV 209
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26 Identity = 71/186 (38.17%), Postives = 119/186 (63.98%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR--QSGRRLWD---PKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAM 549 GRG++++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V+L+I++S GK+ +Y S + + ILE+Y R S ++L + EN E ++K + ++ R+ GED+ SL+ KEL +LE L + SIR +++ E + ++K K++++ +N L ++++E QE+ + Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEY-STDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQL 186
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.114e-26 Identity = 67/184 (36.41%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQEL 543 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+LI++++ G++++Y + S+ +E+Y + + + + + E ++++E +Q R++ GE + SL ++L LE LE G+ IR K++E ++E M+K + + YL+ + + E A+Q L Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA--NNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNL 199
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 68/170 (40.00%), Postives = 109/170 (64.12%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYH------RQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLK 498 GRG++E+KRIEN NRQVT+SKRRNG+LKKA E++VLCDA+V+LII++S GK++++ S + LE+Y+ + S L +H++ E+ R+K + + +Q RH+ GED+ L+ KEL LE LE L R +++ E+++ +R+ + + E + LK Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF--GSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLK 169
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.606e-26 Identity = 54/144 (37.50%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWD-PKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKME 447 GRG++E+K+IEN +NRQVT+SKRR G+LKKA E+ +LCDA++ +I+++ +GKM++Y SP + +I ++Y + R + + + E+ R+K EN+R++I +R G+D++SL +++ LE +E L +R ++ + ++ Sbjct: 2 GRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLD 145
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 68/177 (38.42%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQY--HRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQEL 543 GRGKIEIKRIENA++RQVT+SKRR+G+LKKA+E++VLCDA+V++I+++ SGK+ +Y ST + L +Y H+ S K E E++ +K + ++Q K L G+ ++ L KEL +LE L + L+++R+++ + + ++ E+ + L + + RQ QEL Sbjct: 2 GRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY--SSTGMKQTLSRYGNHQSSSA----SKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQ-----RAELENETLRRQVQEL 167
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 72/173 (41.62%), Postives = 110/173 (63.58%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRL--WDPKHENLSN--EIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM----ETMRKNGKMMEEEHNYLKFVLRQ 513 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LI++++ GK++++CS S + LE+Y R S L P E S+ E ++K + D +Q R+L GED+ L+ KEL LE L+ L IR +++ M ++K +M+ E + LK L + Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTS-CMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEE 173 The following BLAST results are available for this feature:
BLAST of CX290243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290243 ID=CX290243; Name=CX290243; organism=Citrus clementina; type=EST; length=750bpback to top |