CX290243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 81/236 (34.32%), Postives = 128/236 (54.24%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYH------RQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVL---------RQQEIARQQQELAMENSV--------SAEIDYQRENHHDYAYHVQPIQPNLQER 645 GRG++E+KRIEN NRQVT+SKRRNG+LKKA E++VLCDA+V+LII++S GK++++ S + LE+Y + S L + ++ +E+ ++K + + +Q RHL GED+ L+ KEL LE LE L R +++ E++E +R+ + + E + LK L R + A Q +EN SA +D + Y + P + N +R Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF--GSAGITKTLERYQHCCYNAQDSNNAL--SETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHSAAMDSEPTLQIGYPHQFVPAEANTIQR 233
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 69/194 (35.57%), Postives = 117/194 (60.31%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEI 573 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+LI+++S G++++Y + S +E+Y + + + + + E +++ + +Q + R+ GE +++LN ++L LE +E G+ IR K++E ++E M+K + + YL+ + + E R QQ M S S ++ Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKAT--IERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETE--RSQQMNLMPGSSSYDL 207
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 71/184 (38.59%), Postives = 116/184 (63.04%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPKHENLSN---EIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYL--KFVLRQQEIARQQQ 537 GRG++++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V LI++++ GK+ +Y + S + +LE+Y R S ++L H + + E ++K + +Q + GED+ SLN KEL LE L + L IR +++ E + ++K + ++E++N L K R++E+ +Q Q Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDS-CMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQ 184
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 76/216 (35.19%), Postives = 130/216 (60.19%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS----GRRLWDPKHE---NLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM----ETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQPIQPN 633 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS S+ LE+Y + S + + ++E + NE ++K + +Q R+L GED+ +L KEL LE L++ L IR +++ M +++ +M+ E + L+ R+ E + Q E+ + + Y+R++ H VQ + P+ Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-GQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLR---RKLEESNQLHGQVWEHGATL-LGYERQSPH----AVQQVPPH 208
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 70/205 (34.15%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQ-IKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVS-AEIDYQRENHHD 600 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+LI+++S G++++Y + S+ +E+Y + + + + ++ E +++++ +Q R + G+ I++++ ++L +E+ LE G+ IR +++E ++E M+K ++ ++ YL+ + + E R QQ L M + S +E D+ N +D Sbjct: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA--NNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENE--RGQQPLNMMGAASTSEYDHMVNNPYD 202
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.052e-25 Identity = 75/204 (36.76%), Postives = 127/204 (62.25%), Query Frame = 1 Query: 22 RGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSG--RRLWDPKHENL---SNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM-----ETMRKNGKMMEEEHNYLKFVLRQQ--EIARQQQELAME--NSVSAEIDYQREN 591 R KI+I++I+NA+ RQVT+SKRR G+ KKA+E++VLCDA V+LII++S+GK+ ++C S+S+ ++LE+++ QS +L P E +++ R+ +E +LR + GE++ L+ +EL LE ALE GL + + +S+K+ E +K ++M+E LRQQ ++ + + L M+ N+V A + EN Sbjct: 3 REKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC--SSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKR-----LRQQGTQLTEENERLGMQICNNVHAHGGAESEN 199
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25 Identity = 63/147 (42.86%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLW-----DPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM 444 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+VSLI++++ GK++++CS S +++ LE+Y + S + + EN E ++K + +Q + R+L GED+ LN KEL LE L+ L +R +++ M Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTS-NMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYM 147
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25 Identity = 62/147 (42.18%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLW-----DPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM 444 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS S++++ L++Y + S + + EN E ++K + +Q + R+L GED+ LN KEL LE L+ L +R +++ M Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYM 147
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 71/205 (34.63%), Postives = 124/205 (60.49%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPST--SLVDILEQYH---RQSGRRLWDPK-HENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQ----QELAMENSVSAEIDYQREN 591 GRG+IEIKRIEN ++RQVT+ KRRNG+LKKA E++VLCDA+V+LI+++S G++++Y + + + +D ++ H SG L + + E +++ + +Q +HL G+++S+L+ KEL LE LE G+ IR +++E ++ M K ++ ++ L+ + ++E QQ + AME +A Q++N Sbjct: 2 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQQLQQVTVARSAAMELQAAAAAQQQQQN 206
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 60/199 (30.15%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 94 GILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHD------------YAYHVQPIQPNLQE 642 G+LKKA+E+ +LCDA++ +II++SSGKM ++ SP S+ +I+++Y + SG ++ + EI R+K E D++Q +RH GED++SL E++ LE LE + +R ++ ++++ +R+ M+EE++ L V++ A +Q++ + + + +++H + + +QP QPNLQ+ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKLSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAASMEQKMVDPSMLDHFGVFYQDDHQAARSSMLQLSPQLHPFRLQPAQPNLQD 200 The following BLAST results are available for this feature:
BLAST of CX290243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290243 ID=CX290243; Name=CX290243; organism=Citrus clementina; type=EST; length=750bpback to top |