CX290243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 69/185 (37.30%), Postives = 110/185 (59.46%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLS----------NEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQEL 543 GRG++E+KRIE NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS S+S++ LE+Y + + + N+S E ++K + +Q R+L GED+ LN KEL +LE L+ L IR +++ M + + E N L+Q+ + Q L Sbjct: 2 GRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQKCN----YGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLNL 181
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 72/235 (30.64%), Postives = 134/235 (57.02%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKH--ENLSNEIE---RIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIA------------RQQQELAMENSVSAEIDYQRENHHDYAYHVQPIQPNLQERI**HF 660 GRGK+E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+++L+I+++ GK++++CS + + +++Y + S + DP ++L ++ + ++K + +Q RHL GE++S ++ EL LE ++ L IR ++ +++ ++ +M+ E + L+ L + A +QQQ + +S+ YQ A +P+Q N+ ++ H+ Sbjct: 2 GRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATM-DPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSS---YQSNPPIQEAGFFKPLQGNVALQMSSHY 232
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 68/194 (35.05%), Postives = 119/194 (61.34%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR--QSGRRLWDPKHEN--LSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHNYL--KFVLRQQEIARQQQELAMENSVSAE 570 GRGKI IKRI+N NRQVT+SKRR G++KKA+E+ +LCDA V LI+++ +G+++D+ S+S+ I+E+Y + RL +P E E+ ++++ + R L GE+IS+ ++L L++ +E L SIR+K+ +E++ + + G ++++E++ L KF + Q ++L S S+E Sbjct: 2 GRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF--SSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIAHQRNIELHKKLNSGESTSSE 193
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 62/183 (33.88%), Postives = 111/183 (60.66%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQE 540 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+L+++++ G++++Y + S +E+Y + + + + + E +++ + + + R++ GE ++ + KEL LE +E G+ IR K++E ++E M+K + + YL+ + + E A+ Q + Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKAT--IERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQ 198
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.160e-24 Identity = 65/178 (36.52%), Postives = 110/178 (61.80%), Query Frame = 1 Query: 13 EGGRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQE 519 + GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+LI+++S G++++Y + S+ +E+Y + + + + + E +++++ +Q R L GE I S++PKEL LE LE + IR K++E +++ M+K + ++ L+ + + E Sbjct: 16 KSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENE 191
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 66/182 (36.26%), Postives = 114/182 (62.64%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLS-----NEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQ 537 GRGKIEIKRIEN++NRQVT+ KRRNG+LKKA E++VLCDA+V+LI++++ G++++Y + ++ +E+Y + + ++ E +++++ +Q R+L G+ +SSL+ KEL +E+ LE + IR K+ E ++E +K ++ E+ YL+ + E+ R QQ Sbjct: 2 GRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA--NNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLR--TKVAEVERYQQ 179
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24 Identity = 64/180 (35.56%), Postives = 111/180 (61.67%), Query Frame = 1 Query: 7 RHEGGRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQE 519 + + GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+LI+++S G++++Y + S+ +E+Y + + + + + E +++++ +Q R L GE I S++PKEL LE L+ + IR K++E +++ M+K + ++ L+ + + E Sbjct: 14 QRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENE 191
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24 Identity = 64/167 (38.32%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHEN---LSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLK 498 GRGK+E+KRIEN RQVT+SKR++G+LKKA E++VLCDA+VSLII+++ GK++++ + +E+Y+R L + E+ L E+ ++K + + + R+L GED+ ++ KEL LE LE L + R +++ E+ME +R+ + + + +N LK Sbjct: 2 GRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRT--IERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLK 166
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24 Identity = 71/217 (32.72%), Postives = 123/217 (56.68%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYH--RQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMEN------------SVSAEIDYQRENHHDYAYHVQPIQ 627 GRGK+E+KRIEN +RQVT++KRRNG+LKKA E+++LCDA+V+LII++ G++ ++ S S+ + LE+Y + + P++E E ++K + +Q R++ GED+ L+ KEL LE+ +E L IR ++++ + + K E++ L +++ ++ QE + EN S S+ + + +HH H P Q Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEF-SSSSCMYKTLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDL-----NKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQ 212
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24 Identity = 71/217 (32.72%), Postives = 123/217 (56.68%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYH--RQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMEN------------SVSAEIDYQRENHHDYAYHVQPIQ 627 GRGK+E+KRIEN +RQVT++KRRNG+LKKA E+++LCDA+V+LII++ G++ ++ S S+ + LE+Y + + P++E E ++K + +Q R++ GED+ L+ KEL LE+ +E L IR ++++ + + K E++ L +++ ++ QE + EN S S+ + + +HH H P Q Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEF-SSSSCMYKTLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDL-----NKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQ 212 The following BLAST results are available for this feature:
BLAST of CX290243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290243 ID=CX290243; Name=CX290243; organism=Citrus clementina; type=EST; length=750bpback to top |