CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP3_HUMAN (Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16 Identity = 73/225 (32.44%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 19 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 E T+ NK + + + + IFGG L++ V S PFL L LDI S+ V ++ D LR F+ E L+ T +KS K IQ L K+L LHL RF + + K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++VT V+ +AY+LFY Sbjct: 291 ENSTLSASNKCCINGASTVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELD--ETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP17_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17A PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 64/187 (34.22%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP33_DANRE (Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio GN=usp33 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T++D L F A + L+G S + K K+Q+L +IL +HL RF + STK+ V FPL+ L + L SA Y+L++ + HHG S GHY A R N W FDD SVT + S V + +AYVLFYK+ Sbjct: 521 VVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHG-TASSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQNAEAYVLFYKK 669
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP2_CHICK (Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 71/207 (34.30%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 40 KNKSAVTRTQSFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 K++ R Q S +SD+F GQLKS + ++ S PF L L I Y E T+ D LRLF+ + L+G + T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S Y L A V++H GHYTA + + +W F+D+ VT + +S V AY+LFY+ Sbjct: 147 KSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSCNHAVYNLYA-VSNHSGTTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 349
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP42_HUMAN (Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.969e-15 Identity = 63/182 (34.62%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 97 IFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 IFGG L+S VK K S T P+L + L+I +A ++ AL F PE L+G + +V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY Sbjct: 233 IFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: U17L6_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 6 OS=Homo sapiens GN=USP17L6 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.877e-15 Identity = 63/187 (33.69%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + + Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP33_HUMAN (Ubiquitin carboxyl-terminal hydrolase 33 OS=Homo sapiens GN=USP33 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.064e-15 Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T++D L F A + L+G S + K K+Q +IL +HL RF + STK+ V FPL+ L L L A+ Y+L++ + HHG S GHY A R N+ W FDD SVT + S V + +AYVLFY++ Sbjct: 566 VVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRK 714
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: U17L2_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 OS=Homo sapiens GN=USP17L2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.064e-15 Identity = 64/187 (34.22%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A K++ + T +K+LIL L RFS KL K+V++P L + + + + Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAKVTACSITSVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP3_MOUSE (Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.614e-15 Identity = 73/225 (32.44%), Postives = 102/225 (45.33%), Query Frame = 1 Query: 19 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 E T+ NK + + + + IFGG L++ V S PFL L LDI S+ V ++ D LR F+ E L+ T +KS K IQ L K L LHL RF + + K+ V+FPL+ + + L+ P G Y+L A V HHG GHYTA A + +W HF+D++VT V +AY+LFY Sbjct: 291 ENSTLSASNKCCINGASTVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELD--ETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGRWFHFNDSTVTVTDEETVGKAKAYILFY 508
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP33_PONAB (Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.614e-15 Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T++D L F A + L+G S + K K+Q +IL +HL RF + STK+ V FPL+ L L L A+ Y+L++ + HHG S GHY A R N+ W FDD SVT + S V + +AYVLFY++ Sbjct: 534 VVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRK 682 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |