CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP9_YEAST (Ubiquitin carboxyl-terminal hydrolase 9 OS=Saccharomyces cerevisiae GN=UBP9 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14 Identity = 61/214 (28.50%), Postives = 99/214 (46.26%), Query Frame = 1 Query: 37 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------DQ--AYVLFYKQ 642 P+ + +T + + ++D+F G L + +K + ++ +PFL +++ + I+ L+ + E L G G+ A++ V ++ L IL LHL RF Y + + KL + +PL L + ++ +KYEL V H G P GHY R WL +DD +V +I VL DQ AYVLFYK+ Sbjct: 456 PRMRFGPQKTDNSNDNFITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTF---NTSVYKKYELSGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTGHPGDQTTAYVLFYKE 666
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP8_YEAST (Ubiquitin carboxyl-terminal hydrolase 8 OS=Saccharomyces cerevisiae GN=UBP8 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14 Identity = 59/192 (30.73%), Postives = 90/192 (46.88%), Query Frame = 1 Query: 97 IFGGQLKSVVKAQG--NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAEGRK---------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 +F G L+S + G N + T+ PFL L LDI + + + L F E L+ + A K + I L +L+L L RF + GS KL + FP L + ++ T + YEL+ V+H G ++GHY A + QW F+D+ V++I +VL +QAY+LFY Sbjct: 278 VFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK--KLYECLDSFHKKEQLKDFNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNM-KNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFY 465
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_DROVI (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila virilis GN=Usp36 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14 Identity = 62/187 (33.16%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR--KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 +S IFGG L+S V+ N S T Q F L LDI T+E+A + + E LE G V+A K ++ L + L RFS KL K + F ++ L R +P+A + Y LV+ VTH G GHYTA + +FDD+ V I V + AY++FY+ Sbjct: 319 ISQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI--RKADTLEEAFDGYFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MMGNKLTKQISFKPRIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTEAGSYYNFDDSYVKPIAMQSVCNTNAYIMFYE 500
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP33_XENTR (Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis GN=usp33 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14 Identity = 53/148 (35.81%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 208 TIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 T++D L F A + L+G S + K K+Q +IL +HL RF + STK+ V FPL+ L L L ++ Y+L++ + HHG S GHY A R N+ W FDD SVT + + V + +AYVLFY++ Sbjct: 518 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPSQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAEAYVLFYRK 664
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP15_MOUSE (Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.312e-14 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 211 IEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 ++D + LF+ E L N A K + + +L +L++HL RFSY KL V FP+ + + L+ P+A +Y L+A H+G GHYTA A+ +D +W +FDD+SV+ +++ AYVLFY++ Sbjct: 788 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYNLIAVSNHYG-GMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQR 932
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP15_HUMAN (Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15 PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 7.312e-14 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 211 IEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 ++D + LF+ E L N A K + + +L +L++HL RFSY KL V FP+ + + L+ P+A +Y L+A H+G GHYTA A+ +D +W +FDD+SV+ +++ AYVLFY++ Sbjct: 788 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYG-GMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQR 932
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP23_ARATH (Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana GN=UBP23 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 9.550e-14 Identity = 59/196 (30.10%), Postives = 89/196 (45.41%), Query Frame = 1 Query: 64 TQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + ++ S + IFGG L+S VK Q + S PFL L LDI +++ AL F+A E L+ Y+ V AKK + + +L +HL RF + S K+ + V F + + + + P KY L + H+GR GHY R + W DD V + V + +AY+LFY Sbjct: 219 SDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDNGAKVYQCERCKQK--VKAKKQLTVSKAPYVLTVHLKRFE--AHRSEKIDRKVDFTSAIDM-KPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP4_BOVIN (Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 49/146 (33.56%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 211 IEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + D + LF+ E L + N A K + +L KIL++HL RFSY KL V FP++ + + + PSA Y+L+A H+G GHYTA A+ N +W +FDD++V+ +++ AYVLFY++ Sbjct: 778 LRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSNHYGA-MGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVLFYQR 922
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP2_MOUSE (Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 67/195 (34.36%), Postives = 98/195 (50.26%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 S + D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G + K+ +K +Q KIL+LHL RFS ++KL V FPL+ + R+ + + Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LFY+ Sbjct: 417 SRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCCRCRA--RKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 605
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP16_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 16 OS=Schizosaccharomyces pombe GN=ubp16 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 1 Query: 82 SALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 S + IFGG L+ ++ + K S T Q L L +D + + D+L+ F E L N +V A K + I IL +H RF++ S+K+ K + +P LG + P+ YEL+ + H G GHY + + N WL FDD V+ +VL+ QAY+L YK+ Sbjct: 245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSS---LADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLG-PYMSDPNCSCW-YELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKR 428 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |