CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP13_YEAST (Ubiquitin carboxyl-terminal hydrolase 13 OS=Saccharomyces cerevisiae GN=UBP13 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 58/196 (29.59%), Postives = 92/196 (46.94%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGST--KLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYK 639 +SD+F G L + +K + ++ +PFL +++ + I++ L+ + E L G G+ A++ V ++ L L LHL RF Y + + KL ++ +PL L + + S +KYEL V H G P GHY + ++ WL FDD +V A+ VL AYVLFYK Sbjct: 474 ISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSI---NSKVCQKYELAGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATAYVLFYK 666
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: U17L1_HUMAN (Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1 OS=Homo sapiens GN=USP17L1P PE=5 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 62/187 (33.16%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A ++ + T +K+LIL L RFS KL K+V++P L + + + + Y L A + H G GHY + + QW DDA VT VL QAYVLFY Q Sbjct: 193 IHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFS--DVAGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_DROPS (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila pseudoobscura pseudoobscura GN=Usp36 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 L+ IFGG L+S V+ + S T Q F L LDI T+E+A + + E LE G V+A K ++ L + L RFS KL K++ F ++ L R +P+A + Y LV+ VTH G GHYTA + + +FDD+ V I V + AY++FY+ Sbjct: 296 LNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKS--DTLEEAFDGYFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MIGNKLTKTISFKPRIDLSRFAARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYVRPIAMQSVCNTNAYIMFYE 477
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_DROAN (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila ananassae GN=Usp36 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 60/187 (32.09%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 L IFGG L+S V+ N S T Q F L LDI ++E+A + + E LE + G V+A K +++ L + L RFS KL K + F ++ L + +P+A + Y LV+ VTH G GHYTA + +FDD+ V I V + AY++FY+ Sbjct: 301 LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS--DSLEEAFEGYFSREKLEDFGYKCEGCKKKVSATKQFRLERAPITLCIQLKRFS---MMGNKLTKQITFKPRIDLSKFAARSPAASVQPLIYRLVSMVTHLGVSQHCGHYTAIGSTEAGSYYNFDDSYVRPIAIQSVCNTNAYIMFYE 482
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP27_MOUSE (Ubiquitin carboxyl-terminal hydrolase 27 OS=Mus musculus GN=Usp27 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 66/225 (29.33%), Postives = 95/225 (42.22%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL-------------VLGRDLLVTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY-KQV 645 + IF G L+S V Q + S T+ P + LD+ + + T+ D LR F+ PE+L G+ + K + ++ L + H RF + ++ K+ + FPL+L V G+ L T SA KY L A V H G S GHYT+ R+ DQW DDA +T VL + Y+LFY KQV Sbjct: 199 IDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGTLES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQV 422
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: U17L4_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4 OS=Homo sapiens GN=USP17L4 PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 61/187 (32.62%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A ++ + T +K+LIL L RFS KL K+V++P L + + + + Y L A + H G G+Y + + QW DDA VT + VL QAYVLFY Q Sbjct: 193 IHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFS--DVAGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP4_MOUSE (Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 298 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 A K + +L KIL++HL RFSY KL V FP++ + + + SA Y+L+A H+G GHYTA A+ N +W +FDD+SV+ +++ AYVLFY++ Sbjct: 807 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGA-MGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQR 921
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: U17L8_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8 OS=Homo sapiens GN=USP17L8 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13 Identity = 61/187 (32.62%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A ++ + T +K+LIL L RF KL K+V++P L + + + + Y L A + H G G+Y + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFC--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_MOUSE (Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.629e-13 Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 67 QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 Q+ + + IFGG L+S VK K+ S T P+L + L+I A I AL LF + L G V A K I S +L L L RF+ S G K+ K V +P L + R + S + Y L A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++ Sbjct: 234 QTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAA--NIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP4_HUMAN (Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 211 IEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + D + LF+ E L + N A K + +L KIL++HL RFSY KL V FP++ + + + SA Y+L+A H+G GHYTA A+ N +W +FDD++V+ +++ AYVLFY++ Sbjct: 778 LRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGA-MGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQR 922 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |