CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_DROSI (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila simulans GN=Usp36 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 L IFGG L+S V+ N S T Q F L LDI ++EDA + E LE G V+A K ++ L + L RFS KL K + F ++ L + +P+A+ + Y LV+ VTH G GHYTA + +FDD+ V I V + AY++F++ Sbjct: 203 LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI--RKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MIGNKLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPITMQNVCNTNAYIMFFE 384
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: NOT_DROME (Ubiquitin carboxyl-terminal hydrolase nonstop OS=Drosophila melanogaster GN=not PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 54/192 (28.12%), Postives = 88/192 (45.83%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVH------TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q N S T PF + LD+ H T+ D L ++ E+L + + + K ++TL ++ HL RF + + K+ ++FP++ + + +A G ++ L A V H G + GHYTA R+ D W+ DD +T +VL + Y+LFY Sbjct: 537 IDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 727
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP4_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 4 OS=Schizosaccharomyces pombe GN=ubp4 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13 Identity = 68/221 (30.77%), Postives = 100/221 (45.25%), Query Frame = 1 Query: 19 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPF--LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD---QAYVLFYKQ 642 EW NKS V F GQL S + + S T PF L + +D S V ++++ L FSAPE L+G+ V +AKK + I L + LI+ + RF G K+ + LQ+ +LV PS + Y L A + H+G+ GHY +D FN++W H DD+ V +G L + +Y+LFYK+ Sbjct: 213 EWNLHLRSNKSIVVNN-----------FVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV-SLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRKKIDTPLGLSLQIP--SKMLVPPSFQSGIGYIPSNYNLFAFICHYGQ-LENGHYISDV-LFNNEWCHIDDSIVRTVGGITDLREDFSSSYILFYKR 417
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP4_PONAB (Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13 Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 211 IEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + D + LF+ E L + N A K + +L KIL++HL RFSY KL V FP++ + + + SA Y+L+A H+G GHYTA A+ N +W +FDD++V+ +++ AYVLFY++ Sbjct: 778 LRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKSDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGA-MGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQR 922
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP49_HUMAN (Ubiquitin carboxyl-terminal hydrolase 49 OS=Homo sapiens GN=USP49 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13 Identity = 69/219 (31.51%), Postives = 98/219 (44.75%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIE--------------DALRLFSAPENLEGY-----------RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLG----RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ---WLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 ++ IF GQL S V N S T++PF L L+ + E H IE + L F+ E LEG R S+ + A+K + I L ++L LHL RF + G K+ V F L + RD+L + E Y+L A V HHG+ GHYTA +N + W+H +D+ + +V QAY+LFY Q Sbjct: 441 VNTIFHGQLLSQVTCISCNYKSNTIEPFWDLSLE-FPERYHCIEKGFVPLNQTECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYC--YNTEGGFWVHCNDSKLNVCSVEEVCKTQAYILFYTQ 656
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_DROYA (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila yakuba GN=Usp36 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13 Identity = 60/187 (32.09%), Postives = 85/187 (45.45%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 L IFGG L+S V+ N S T Q F L LDI ++EDA + E LE G V+A K ++ L + L RFS KL K + ++ L + +P+A+ + Y LV+ VTH G GHYTA + +FDD+ V I V + AY++FY+ Sbjct: 298 LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI--RKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MIGNKLTKQISLKPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRPIAMQSVCNTNAYIMFYE 479
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP15_ARATH (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.190e-13 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 97 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 +FGG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S AG V A+K + I IL + L RF G G K++K + FP L D++ + G Y L A + H GHY + + W DD+ + + ++V+ + AY+LFY Sbjct: 562 MFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGW-VESLQDALTQFTRPEDLDGENMYRCSRC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML----DMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFY 741
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP27_HUMAN (Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13 Identity = 66/227 (29.07%), Postives = 99/227 (43.61%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVL-------------GRDLLVTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY-KQV 645 + IF G L+S V Q + S T+ P + LD+ + + T+ D LR F+ PE+L G+ + ++S K T++K+ ++ H RF + ++ K+ + FPL+L + G+ L T S KY L A V H G S GHYT+ R+ DQW DDA +T VL + Y+LFY KQV Sbjct: 199 IDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQ--SYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQV 422
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP25_ARATH (Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13 Identity = 58/195 (29.74%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVK-----AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 S + +IFGG L+S VK A+ NKA + + L+I + +++++L+ F E L+G YR S +VTA+K + I IL++ L RF G K+ K++ F LVL + +Y+L + H G P GHY A + +W +D+ V+ +VL ++AY+LF+ + Sbjct: 150 SVVKEIFGGALQSQVKCLSCGAESNKADEIMD----ISLEILQSS--SVKESLQKFFQSEILDGNNKYRCESCEK--LVTARKQMSILQAPNILVIQLKRF--GGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_DANRE (Ubiquitin carboxyl-terminal hydrolase 20 OS=Danio rerio GN=usp20 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13 Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 208 TIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS-AEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 T+ED L F A + L+G S + K K+ L +IL +HL RF + S K++ V FPL+ + + L S ++ Y+L++ + HHG S GHY A + N QW FDD VT + + V + +AYVLFY++ Sbjct: 538 TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESPSQITTYDLLSVICHHGTAGS-GHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRK 684 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |