CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP10_ARATH (Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana GN=UBP10 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13 Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 298 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 A K + + L IL+ HL RF+Y K+ V FP+ + + + + YEL A H+G GHYTA A+ +D +W HFDD+ V+++ S++ + AYVLFY++V Sbjct: 780 ANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYG-GLGGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRRV 895
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP9_ARATH (Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana GN=UBP9 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12 Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 298 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 A K + + L IL+ HL RF+Y K+ V FP+ + + + + YEL A H+G GHYTA A+ +D +W HFDD+ V+++ S++ + AYVLFY++V Sbjct: 779 ANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYG-GLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV 894
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_HUMAN (Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12 Identity = 66/203 (32.51%), Postives = 91/203 (44.83%), Query Frame = 1 Query: 43 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 N A Q+ + + IFGG L+S VK K+ S T P+L + L+I A I AL LF + L G V A K I S +L L L RF+ S G K+ K V +P L + R + + + Y L A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++ Sbjct: 226 NGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP22_MOUSE (Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12 Identity = 66/226 (29.20%), Postives = 97/226 (42.92%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ PF + LD+ ++ T+ D LR F+ PE+L ++ +G + ++S K T+ K+ I+ HL RF + ++ K+ V FPL+L + + S E R KY L A V H G S GHYT+ R DQW DDA +T VL + Y+LFY Sbjct: 297 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_XENTR (Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis GN=usp20 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12 Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 208 TIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-RKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 T+ED L F A + L+G S + K K+ L +IL +HL RF + S K+ V FPL+ + R L Y+L+A + HHG S GHY + + N QW FDD VT + + V + +AYVLFY++ Sbjct: 508 TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRK 654
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_BOVIN (Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12 Identity = 52/150 (34.67%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP-SAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T+ED L F A + L+G S + K K+ L +IL +HL RF + S K+ V FPL+ + R L +++ Y+L++ + HHG S GHY A + N QW FDD VT + + V + +AYVLFY++ Sbjct: 534 VVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGS-GHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRK 682
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_XENLA (Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12 Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 208 TIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-RKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 T+ED L F A + L+G S + K K+ L ++L +HL RF + S K+ V FPL+ + R L Y+L+A + HHG S GHY + + N QW FDD VT + + V + +AYVLFY++ Sbjct: 464 TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEVLCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRK 610
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP22_BOVIN (Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 66/226 (29.20%), Postives = 97/226 (42.92%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ PF + LD+ + T+ D LR F+ PE+L ++ +G + ++S K T+ K+ I+ HL RF + ++ K+ V FPL+L + + S E R KY L A V H G S GHYT+ R DQW DDA +T + VL + Y+LFY Sbjct: 286 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFY 506
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP21_HUMAN (Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 63/193 (32.64%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYTA R W ++D+ V+ + ++V + YVLFY+ Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP21_BOVIN (Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 63/193 (32.64%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYTA R W ++D+ V+ + ++V + YVLFY+ Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |