CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_PONAB (Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii GN=USP20 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP-SAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T+ED L F A + L+G S + K K+ L +IL +HL RF + S K++ V FPL+ + R L +++ Y+L++ + HHG S GHY A + N QW FDD VT + + V + + YVLFY++ Sbjct: 535 VVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGS-GHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRK 683
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_MOUSE (Ubiquitin carboxyl-terminal hydrolase 20 OS=Mus musculus GN=Usp20 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 52/150 (34.67%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP-SAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T+ED L F A + L+G S + K K+ L +IL +HL RF + S K+ V FPL+ + R L +++ Y+L++ + HHG S GHY A + N QW FDD VT + + V + +AYVLFY++ Sbjct: 538 VVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTAGS-GHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLFYRK 686
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP20_HUMAN (Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens GN=USP20 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 202 VHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP-SAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 V T+ED L F A + L+G S + K K+ L +IL +HL RF + S K++ V FPL+ + R L +++ Y+L++ + HHG S GHY A + N QW FDD VT + + V + + YVLFY++ Sbjct: 536 VVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGS-GHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRK 684
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP49_MOUSE (Ubiquitin carboxyl-terminal hydrolase 49 OS=Mus musculus GN=Usp49 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 68/217 (31.34%), Postives = 97/217 (44.70%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIE--------------DALRLFSAPENLEGY-----------RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLG----RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ---WLHFDDASVTAIGTSKVLHDQAYVLFY 636 ++ IF GQL S V N S T++PF L L+ + E H IE + L F+ E LEG R S+ + A+K + I L ++L LHL RF + G K+ V F L + RD+L + E Y+L A V HHG+ GHYTA +N + W+H +D+ + +V QAY+LFY Sbjct: 438 VNTIFHGQLLSQVTCISCNYKSNTIEPFWDLSLE-FPERYHCIEKGFVPLNQTECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVIFDQVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYC--YNTEGGFWVHCNDSKLDVCSVEEVCKTQAYILFY 651
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP36_DROME (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila melanogaster GN=Usp36 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 59/187 (31.55%), Postives = 85/187 (45.45%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 L IFGG L+S V+ N S T Q F L LDI ++EDA + E LE G V+A K ++ L + L RFS KL K + F ++ L + + +A+ + Y LV+ VTH G GHYTA + +FDD+ V I V + AY++F++ Sbjct: 297 LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI--RKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFFE 478
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP22_HUMAN (Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 66/226 (29.20%), Postives = 96/226 (42.48%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ PF + LD+ + T+ D LR F+ PE+L ++ +G + ++S K T+ K+ I+ HL RF + ++ K+ V FPL+L + + S E R KY L A V H G S GHYT+ R DQW DDA +T VL + Y+LFY Sbjct: 297 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP22_DANRE (Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 63/224 (28.12%), Postives = 90/224 (40.18%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ PF + LD+ + T+ D LR F+ PE+L + +G + K + ++ L + HL RF + ++ K+ V FPL+L + + S E R KY L A V H G S GHYT R DQW DDA +T VL + Y+LFY Sbjct: 278 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGDSHPSGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQGTLES-GHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 498
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP21_MOUSE (Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 63/193 (32.64%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYTA R W ++D+ V+ + ++V + YVLFY+ Sbjct: 369 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 557
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UB22A_XENLA (Ubiquitin carboxyl-terminal hydrolase 22 A OS=Xenopus laevis GN=usp22-A PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 66/226 (29.20%), Postives = 96/226 (42.48%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ PF + LD+ + T+ D LR F+ PE+L ++ +G + ++S K T+ K+ I+ HL RF + ++ K+ V FPL+L + + S E R KY L A V H G S GHYT+ R DQW DDA +T VL + Y+LFY Sbjct: 295 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 515
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBPW_MOUSE (Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 62/191 (32.46%), Postives = 88/191 (46.07%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 S + DIFGG +S +K QG S T FL + LDI S +++ AL E L G G + A K++ + K+L++ L RFS + KL + V +P L L + L P+ Y L A + H G GHY + + +W DD VT + VL++ AYVLFY Q Sbjct: 164 SPIHDIFGGWWRSQIKCLLCQGT--SDTYDRFLDIPLDISS--AQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 347 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |