CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP11_HUMAN (Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 53/163 (32.52%), Postives = 83/163 (50.92%), Query Frame = 1 Query: 187 IYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATVTHHG--RDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + +A +++ + LF+ E LE Y S + A K + + L +ILI+HL RFSY KL V FP++ + + ++ P E KY+L+A H+G RD GHYT A + QW +FDD SV+ + +++ AYVLFY++ Sbjct: 773 VMKKAPVRLQECIELFTTVETLEKENPWYCPSCKQHQ---LATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRD---GHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQR 929
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UB22B_XENLA (Ubiquitin carboxyl-terminal hydrolase 22 B OS=Xenopus laevis GN=usp22-B PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 66/228 (28.95%), Postives = 98/228 (42.98%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL--VTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ PF + LD+ + T+ D LR F+ PE+L ++ +G + ++S K T+ K+ I+ HL RF + ++ K+ V FPL+L D++ + S E R KY L A V H G S GHYT+ R DQW DDA +T V+ + Y+LFY Sbjct: 295 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL----DMMPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVIDSEGYLLFY 515
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP21_RAT (Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus GN=Usp21 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 62/193 (32.12%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 639 S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + Y+L A H G GHYTA R W ++D+ V+ + ++V + YVLFY+ Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGD--FASDKVGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP9_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 9 OS=Schizosaccharomyces pombe GN=ubp9 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.939e-12 Identity = 63/198 (31.82%), Postives = 91/198 (45.96%), Query Frame = 1 Query: 79 PSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS---KVLHDQ-----AYVLFY 636 P + +F G L S K ++ + FL L +DI + ++ LR FSA E L + A+K +KI+ L KIL LHL RF Y +G KL ++ F ++ L +AE R Y L + + H G P +GHY + R W+ FDD +VT + + + DQ AYVLFY Sbjct: 227 PKWVHSLFEGTLTSETKCLTCENITSRDESFLDLSIDIENHT--SVTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTEDAENAE-RMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQRFFGDQPGQATAYVLFY 421
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP51_HUMAN (Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.939e-12 Identity = 58/221 (26.24%), Postives = 93/221 (42.08%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA---EGR----------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 + IF G L+S V Q + S T+ P + LD+ + + ++ D L+ F+ PE+L + + K + ++ L + HL RF + + K++ + FPL+L + L T + EG+ KY L A + HHG S GHYT+ R DQW DDA +T +L+ + Y+LFY Sbjct: 484 IDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFY 703
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP12_YEAST (Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae GN=UBP12 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11 Identity = 52/155 (33.55%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 196 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK------KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 636 E T++D L+LFS PE L T + T K K +++ IL++HL RF S K+ +V FP+ L L R ++ G Y+L A H+G GHYTA + F D +W +FDD+ VT + AY+LFY Sbjct: 959 ERTITLDDCLQLFSKPEIL-----GLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYG-GLGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFY 1107
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP8_ARATH (Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana GN=UBP8 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 44/117 (37.61%), Postives = 58/117 (49.57%), Query Frame = 1 Query: 298 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 A K + + L +IL++HL RFSY KL V FPL L L + +Y L A H+G GHYTA + D+W FDD+ V I K+ AYVLFYK++ Sbjct: 754 AIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYG-SMGGGHYTAYVHHGGDRWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 869
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP5_ARATH (Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana GN=UBP5 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 298 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 A K + + L ++L++HL RFSY KL V FP+ L L + + ++ + YEL A H+G GHYTA + +D +W +FDD+ ++ I V AYVLFY++ Sbjct: 800 ASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYG-GMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP11_MOUSE (Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 211 IEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATVTHHG--RDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 +++ ++LF+ E LE + SS + T K + + L ++LI+HL RFS+ KL V+FP++ + + ++ P E KY+L+A H+G RD GHYT A + QW + DD SV+ + +++ AYVLFY++ Sbjct: 740 LKECIKLFTTVETLEKENPWYCSSCKQHQLAT--KKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVIKPKNESSPDLYKYDLIAVSNHYGGMRD---GHYTTFACNKDSGQWHYLDDNSVSPVNENQIESKAAYVLFYQR 888
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP12_HUMAN (Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 79 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 639 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY A + +D WL FDD V I + + Y+LFY+ Sbjct: 169 PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPD-RMYDLVAVVVHCGSGPNRGHYIAIVK-SHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |