CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP12_BOVIN (Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 79 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 639 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY A + +D WL FDD V I + + Y+LFY+ Sbjct: 168 PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPD-RMYDLVAVVVHCGSGPNRGHYIAIVK-SHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 366
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UB12B_XENLA (Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis GN=usp12-B PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 79 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 639 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY A + +D WL FDD V I + + Y+LFY+ Sbjct: 169 PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPD-RMYDLVAVVVHCGSGPNRGHYIAIVK-SHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UB12A_XENLA (Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis GN=usp12-A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 79 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 639 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY A + +D WL FDD V I + + Y+LFY+ Sbjct: 169 PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPD-RMYDLVAVVVHCGSGPNRGHYIAIVK-SHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP8_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 8 OS=Schizosaccharomyces pombe GN=ubp8 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 1 Query: 97 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 IF G LK+VV K V P + + LDI T++ L F + E ++ Y S G+ + K + L + + L RF + STK+ K V +P L + + + + Y+L + V H G + GHY A Y+ +QW DD ++ + S+VL+ QAY+LFY + Sbjct: 264 IFSGSLKNVVTCLDCKKERVAVDPLMDISLDINEP---TLQGCLERFVSKEKVQ-YSCHSCGSKNAI---KQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVSYPAFLRMRYNF----NQDDVDYQLYSVVCHKGTLDT-GHYIAYT-YYQNQWFLLDDTTIVEVKESEVLNSQAYLLFYHE 434
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP50_MACFA (Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca fascicularis GN=USP50 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 59/189 (31.22%), Postives = 85/189 (44.97%), Query Frame = 1 Query: 82 SALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT--SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 S ++ +F GQL S+V + K + + F +L L I SE +++D L+ F + L S TA ++ I KI+I HL RF KL + +PL + + + KY L A V H G D GHYTA + F W FDD V+ I + V + AY+LFY Sbjct: 175 SVITQLFEGQLNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFCETKQETAVRA-GISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYICPIFRKYPKYNLCAVVNHFG-DLDGGHYTAFCKNSFTQAWYSFDDTRVSEIPDTSVQNATAYLLFY 361
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP12_MOUSE (Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 79 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 639 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY A + +D WL FDD V I + + Y+LFY+ Sbjct: 169 PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPD-RMYDLVAVVVHCGSGPNRGHYIAIVK-SHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP3_ARATH (Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana GN=UBP3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 66/200 (33.00%), Postives = 91/200 (45.50%), Query Frame = 1 Query: 94 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL------------HDQAYVLFYKQV 645 +IF G L + + + +A + FL L LDI E +I L+ FS+ E L + A+K +KI+ IL++HL RF Y Q KL V FPL+L L V P A+ +Y L A V H G P+ GHY + + N WL FDD +V I S V D Y+LFY+ + Sbjct: 174 NIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSN--TVEPYAD-VEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESL 367
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP16_ARATH (Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana GN=UBP16 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 56/183 (30.60%), Postives = 88/183 (48.09%), Query Frame = 1 Query: 100 FGGQLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 FGG L+S +K + + ++ ++ L ++I + + T++DALR F+ E L+G G+ AKK +KI +L + L RF G G KL+K +RFP L L + S + Y+L + H GHY R N +W DD++V ++L AY+LFY Sbjct: 667 FGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGD-ISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFG--KLNKLIRFPETLDLA-PYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQN-KWYKADDSTVVTSDVERILTKGAYMLFY 844
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP21_SCHPO (Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces pombe GN=ubp21 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 57/182 (31.32%), Postives = 83/182 (45.60%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHD 615 +AL+DIF G++KS VK N S+ V+ F + L++ + + T+ED+ R E L G G+ A K + ++L +L L L RF Y K++ FPL++ L L T ++ V HG D GHY A + D W FDD VT +VL D Sbjct: 334 NALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNV--KGMDTLEDSFRDAIQVETLTGDNKYYAEGHGLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLEIDLEPYLSETADKSESHVYVLHGVLVHGGDLHGGHYYALIKPEKDSNWFKFDDDRVTRATIKEVLED 513 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |