CX290253

Overview
NameCX290253
Unique NameCX290253
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290253 vs. ExPASy Swiss-Prot
Match: PAPL_MOUSE (Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12
Identity = 56/176 (31.82%), Postives = 83/176 (47.16%), Query Frame = 3
Query:   18 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTE-----HDWREGSE-QYRFIEQCL--ASVDRRKQPWLIFAAHRVLGYSS---DYWYGQEGSFQEPMGRE--SLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVN 506
            EP+A+++PYM   GNHE+ +  S                 +  F +P +N    WYS D G  H     TE     H  R   E Q+R++E  L  A+ +R  +PW+I   HR +  S+   D     E   ++ +  +   L+ L+ KY VD+ F+ H H+YER  PIY  Q  N
Sbjct:  191 EPVAASLPYMTCPGNHEQRYNFSNY---------------KARFSMPGDNEG-LWYSWDLGPAHIISFSTEVYFFLHYGRHLIEKQFRWLENDLQKANKNRVARPWIITMGHRPMYCSNADLDDCTRHESRVRKGLHGKLFGLEDLFHKYGVDLEFWAHEHSYERLWPIYNYQVFN 350          
BLAST of CX290253 vs. ExPASy Swiss-Prot
Match: PPA18_ARATH (Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 60/222 (27.03%), Postives = 102/222 (45.95%), Query Frame = 3
Query:   18 EPIASTVPYMIGSGNHERDW-PNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKNNYXXXXXXXXXXXXXXXXSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLF 680
            +P+AS  P+M+  GNHE++  P     + + +S  +       M Y  + + +  +YS +    H  +  +  D+   S+QY +++  L+ VDR + PWLI   H V  Y+S+  +  EG   E M    ++ L     VDI F GHVH YERT      + VN  K++                      + + +P WS++R+  +G  +L   N +  L+
Sbjct:  194 QPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWK-------MPYEESGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFH-VPWYNSNNAHQHEG--DEMMA--EMEPLLYASGVDIVFTGHVHAYERT------KRVNNGKSD-PCGPVHITIGDGGNREGLARKYKDPSPEWSVFREASFGHGELQMVNSTHALW 396          
BLAST of CX290253 vs. ExPASy Swiss-Prot
Match: PAPL_HUMAN (Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 63/230 (27.39%), Postives = 95/230 (41.30%), Query Frame = 3
Query:   18 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTE-----HDWRE-GSEQYRFIEQCL--ASVDRRKQPWLIFAAHRVLGYSS---DYWYGQEGSFQEPMGRE--SLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVN--TEKNNYXXXXXXXXXXXXXXXXSHLSDFSEVTPNWSLYRDYDWGFVKLTAFN 662
            EP+A+++PYM   GNHE  +  S                 +  F +P +N    WYS D G  H     TE     H  R     Q+R++E  L  A+ +R  +PW+I   HR +  S+   D     E   ++ +  +   L+ L+ KY VD+  + H H+YER  PIY  Q  N   E                      L+ F+     WS  R  ++G+ +L   N
Sbjct:  191 EPVAASLPYMTCPGNHEERYNFSNY---------------KARFSMPGDNEG-LWYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNADLDDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVFNGSREMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILN 404          
BLAST of CX290253 vs. ExPASy Swiss-Prot
Match: PPA22_ARATH (Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 45/161 (27.95%), Postives = 79/161 (49.07%), Query Frame = 3
Query:   18 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMF-YVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQ 497
            EP+AS  P+M+  GNHE +      F+   +        A  +  +  + + +  +YS D    H  +  +  D+   S+QY++++  LA VDR+  PW++   H     +++   G+  S      RE+++ L    +VD+ F GHVH YER   +Y N+
Sbjct:  194 EPLASKRPWMVTEGNHEIE------FFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESM-----REAMESLLFNARVDVVFSGHVHAYERFKRVYNNK 343          
BLAST of CX290253 vs. ExPASy Swiss-Prot
Match: PPA25_ARATH (Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 54/226 (23.89%), Postives = 99/226 (43.81%), Query Frame = 3
Query:   18 EPIASTVPYMIGSGNHERDW-PNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESLQRLWQKY----KVDIAFFGHVHNYERTCPIYQNQCVNTEKNNYXXXXXXXXXXXXXXXXSHL----SDFSEVTPNWSLYRDYDWGFVKLTAFNHS 668
            EP A+   ++  +GNHE D+ PN G  +          +      Y  +++ +  WYS      H  +  +   + + + QY ++EQ L  V+R + PWLI   H     S++Y Y         M  ES++ +++ +    KVD+   GHVH+YER+  +   +   T   +Y                 ++    + F++  P++S YR+  +G   L  +N +
Sbjct:  215 EPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPY-----IHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHY---------MEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNRT 426          
The following BLAST results are available for this feature:
BLAST of CX290253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PAPL_MOUSE7.257e-1231.82Iron/zinc purple acid phosphatase-like protein OS=... [more]
PPA18_ARATH9.479e-1227.03Purple acid phosphatase 18 OS=Arabidopsis thaliana... [more]
PAPL_HUMAN9.479e-1227.39Iron/zinc purple acid phosphatase-like protein OS=... [more]
PPA22_ARATH1.617e-1127.95Purple acid phosphatase 22 OS=Arabidopsis thaliana... [more]
PPA25_ARATH6.144e-1123.89Purple acid phosphatase 25 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC02022B11SK IF1 Citrus clementina cDNA clone C02022B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290253 ID=CX290253; Name=CX290253; organism=Citrus clementina; type=EST; length=685bp
GGAATTCGGCACGAGGGGAGCCCATTGCATCAACTGTGCCATACATGATT
GGAAGCGGTAATCATGAACGTGATTGGCCAAATTCAGGATCCTTTTATGA
CACTACTGATTCAGGTGGGGAATGTGGTGTGCCGGCAGAGACCATGTTTT
ATGTCCCCGCTGAGAACAGAGCGAAGTTTTGGTATTCAACTGATTATGGC
ATGTTTCACTTCTGCATAGCTGACACTGAGCATGATTGGAGGGAGGGATC
TGAACAATATAGGTTCATTGAGCAATGCCTTGCTTCTGTGGACAGACGGA
AGCAGCCTTGGCTTATCTTTGCTGCTCATCGCGTACTTGGGTATTCCTCC
GACTATTGGTATGGGCAGGAAGGCTCATTTCAAGAACCCATGGGAAGGGA
AAGTTTGCAGAGGCTTTGGCAGAAGTACAAGGTTGACATTGCATTTTTTG
GCCATGTCCATAACTATGAAAGAACTTGTCCAATCTATCAGAATCAATGT
GTGAATACAGAAAAAAATAATTATACAGGCACCGTGAATGGAACAATTCA
TGTTGTTGTTGGTGGGGGAGGGAGTCACCTGTCAGATTTCAGTGAAGTGA
CACCCAATTGGAGCCTATACAGAGATTATGATTGGGGATTTGTCAAACTT
ACGGCATTTAACCACTCATCTCTCCTCTTTGAGTA
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