CX290254

Overview
NameCX290254
Unique NameCX290254
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.306e-31
Identity = 72/129 (55.81%), Postives = 83/129 (64.34%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GDVSRP+A+TV W+  AQS+T +PMKGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPVIIGDVSRPEAITVEWAKYAQSLTDKPMKGMLTGPVTILCWSFPREDVTR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 2.306e-31
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.002e-31
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV+DL++AGI +IQ+
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDVSRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVDDLQEAGIGIIQI 601

HSP 2 Score: 23.483 bits (49), Expect = 3.002e-31
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  601 IDEPALREGLP 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.793e-31
Identity = 71/129 (55.04%), Postives = 82/129 (63.57%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L+GF FT N WVQSYG+RCVKPPII+GDVSR + +TV WSS AQS TA+PMKGMLTGPVTILNWS+ R D                                E   Q+ALAI+DEV DLEKAGI +IQ+
Sbjct:  509 LNGFLFTKNAWVQSYGTRCVKPPIIWGDVSRAQPITVAWSSYAQSRTAKPMKGMLTGPVTILNWSWPRED----------------------------ITHEEQTKQLALAIRDEVLDLEKAGIRIIQI 609
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.632e-31
Identity = 70/129 (54.26%), Postives = 83/129 (64.34%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP++ GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPVVIGDVSRPEAITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVTR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 8.632e-31
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.123e-30
Identity = 69/129 (53.49%), Postives = 82/129 (63.57%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  TANGWVQSYG+RCVKPP++YGDV+RP  MTV W + AQS+T +P+KGMLTGPVTI  WSFVR+D PR +                               Q+ALAI+DEV DLE AGI VIQ+
Sbjct:  524 LRGFCITANGWVQSYGTRCVKPPLLYGDVARPGPMTVRWITHAQSLTQKPVKGMLTGPVTIACWSFVRDDVPRPV----------------------------VFRQLALAIRDEVADLEAAGIGVIQI 624

HSP 2 Score: 23.483 bits (49), Expect = 1.123e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  624 IDEPALREGLP 634
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.124e-30
Identity = 70/129 (54.26%), Postives = 83/129 (64.34%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP++ GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFIFTQNGWVQSYGSRCVKPPVVIGDVSRPQAITVDWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 1.124e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.442e-30
Identity = 68/129 (52.71%), Postives = 82/129 (63.57%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T NGWVQSYGSRCV+PPI+YGDVSRP  MT+ W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP                              +T  Q+ALAI+DE  DL+ AGI +IQ+
Sbjct:  504 LGGFFATQNGWVQSYGSRCVRPPILYGDVSRPHPMTIEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQP----------------------------LADTANQVALAIRDETVDLQSAGIAIIQV 604
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.883e-30
Identity = 70/129 (54.26%), Postives = 78/129 (60.47%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYG+RCV+PPII GDVSRP+ MT  W S A   T  P+KGMLTGPVT+L WSFVR+DQ                             R ETC QIALAI+DEV DLE  GI  IQ+
Sbjct:  511 LDGFLFTENGWVQSYGTRCVRPPIIAGDVSRPEPMTTRWLSYANDQTDTPVKGMLTGPVTMLQWSFVRDDQ----------------------------SRAETCRQIALAIRDEVLDLEDVGIQAIQI 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECO5E (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.906e-30
Identity = 71/129 (55.04%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQSMT +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSMTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 1.906e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECO57 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 GN=metE PE=3 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.906e-30
Identity = 71/129 (55.04%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQSMT +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSMTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 1.906e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
The following BLAST results are available for this feature:
BLAST of CX290254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ERWCT2.306e-3155.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL3.002e-3154.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFA03.793e-3155.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT388.632e-3154.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVM1.123e-3053.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP31.124e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE1.442e-3052.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD1.883e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO5E1.906e-3055.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO571.906e-3055.045-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC02022B12SK IF1 Citrus clementina cDNA clone C02022B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290254 ID=CX290254; Name=CX290254; organism=Citrus clementina; type=EST; length=418bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCC
AATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TCAGAAATGACCAGCCCAGGTATATAAATGAGAACTGGTTCACTATTGAT
TAACCTTTTGAAATGGAAACATTGTTCAACATAAATTGCTGCCAATTTTG
CAGACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCG
AGGATCTTGAGAAGGCAGGCATTAACGTTATTCAATTGATGAGGCTGCCT
TGAGGGAAGGATTGCCTC
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