CX290254

Overview
NameCX290254
Unique NameCX290254
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOSM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOSE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SE11) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOLU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOLC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOL6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6 GN=metE PE=3 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOL5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECOK1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O1:K1 / APEC GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.207e-30
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEV DLE AGI +IQ+
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVADLEAAGIGIIQI 598

HSP 2 Score: 23.483 bits (49), Expect = 4.207e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  598 IDEPALREGLP 608
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.476e-30
Identity = 69/129 (53.49%), Postives = 80/129 (62.02%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L+GF FT NGWVQSYGSRCVKPPII GD+SRPK +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D                              R     QIALA++DEV DLE AGI +IQ+
Sbjct:  503 LNGFIFTQNGWVQSYGSRCVKPPIIIGDISRPKPITVEWAWYAQSLTQKPVKGMLTGPVTILCWSFPRED----------------------------LDRKTIARQIALALRDEVIDLENAGIGIIQI 603

HSP 2 Score: 23.483 bits (49), Expect = 5.476e-30
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  603 IDEPALREGLP 613
The following BLAST results are available for this feature:
BLAST of CX290254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ECOSM4.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOSE4.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLU4.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLC4.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL64.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL54.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOK14.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO7I4.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO454.207e-3054.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH5.476e-3053.495-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC02022B12SK IF1 Citrus clementina cDNA clone C02022B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290254 ID=CX290254; Name=CX290254; organism=Citrus clementina; type=EST; length=418bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCC
AATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TCAGAAATGACCAGCCCAGGTATATAAATGAGAACTGGTTCACTATTGAT
TAACCTTTTGAAATGGAAACATTGTTCAACATAAATTGCTGCCAATTTTG
CAGACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCG
AGGATCTTGAGAAGGCAGGCATTAACGTTATTCAATTGATGAGGCTGCCT
TGAGGGAAGGATTGCCTC
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