CX290254

Overview
NameCX290254
Unique NameCX290254
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Newman) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain COL) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAA9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH9) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH1) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_STAA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.911e-24
Identity = 65/129 (50.39%), Postives = 75/129 (58.14%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF  T  GWVQSYGSR VKPPIIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR + ++                            QIALAI +EV  LE AGI VIQ+
Sbjct:  487 LQGFLVTKFGWVQSYGSRAVKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQD----------------------------QIALAINEEVLALEAAGIKVIQV 587

HSP 2 Score: 23.0978 bits (48), Expect = 2.911e-24
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            +DE ALREGLP
Sbjct:  587 VDEPALREGLP 597
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_CHLRE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.204e-18
Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L G  FT  GWVQSYGSRCV+PP++  D++     T +   +A    A+P+KG+LTGPVTILNWSF R D                              R     Q+ LA++ EV  LE AG  +IQ+
Sbjct:  512 LGGMLFTRAGWVQSYGSRCVRPPLVVDDITYRGPSTCWEYKVAIPTAAQPVKGLLTGPVTILNWSFPRKD----------------------------ISRAAQAMQLGLALRQEVAALEAAGCTIIQV 612
The following BLAST results are available for this feature:
BLAST of CX290254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STAAE2.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAC2.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAB2.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA92.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA82.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA32.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA22.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA12.911e-2450.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHLRE8.204e-1838.765-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC02022B12SK IF1 Citrus clementina cDNA clone C02022B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290254 ID=CX290254; Name=CX290254; organism=Citrus clementina; type=EST; length=418bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCC
AATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TCAGAAATGACCAGCCCAGGTATATAAATGAGAACTGGTTCACTATTGAT
TAACCTTTTGAAATGGAAACATTGTTCAACATAAATTGCTGCCAATTTTG
CAGACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCG
AGGATCTTGAGAAGGCAGGCATTAACGTTATTCAATTGATGAGGCTGCCT
TGAGGGAAGGATTGCCTC
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