CX290254

Overview
NameCX290254
Unique NameCX290254
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.788e-32
Identity = 72/129 (55.81%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEVEDLEKAGI +IQ+
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVEDLEKAGIGIIQI 601

HSP 2 Score: 23.483 bits (49), Expect = 2.788e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  601 IDEPALREGLP 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.788e-32
Identity = 72/129 (55.81%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEVEDLEKAGI +IQ+
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVEDLEKAGIGIIQI 601

HSP 2 Score: 23.483 bits (49), Expect = 2.788e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  601 IDEPALREGLP 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.788e-32
Identity = 72/129 (55.81%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEVEDLEKAGI +IQ+
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVEDLEKAGIGIIQI 601

HSP 2 Score: 23.483 bits (49), Expect = 2.788e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  601 IDEPALREGLP 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.788e-32
Identity = 72/129 (55.81%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEVEDLEKAGI +IQ+
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVEDLEKAGIGIIQI 601

HSP 2 Score: 23.483 bits (49), Expect = 2.788e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  601 IDEPALREGLP 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.788e-32
Identity = 72/129 (55.81%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R               ET+               QIALA++DEVEDLEKAGI +IQ+
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSR---------------ETI-------------AKQIALALRDEVEDLEKAGIGIIQI 601

HSP 2 Score: 23.483 bits (49), Expect = 2.788e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  601 IDEPALREGLP 611
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.630e-32
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQP                            R  T  QIALA++ E  DLEKAGI +IQ+
Sbjct:  502 LWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQP----------------------------RATTALQIALALRQETLDLEKAGIGMIQI 602

HSP 2 Score: 23.483 bits (49), Expect = 3.630e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  602 IDEPALREGLP 612
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BURP6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 668) GN=metE PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.630e-32
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQP                            R  T  QIALA++ E  DLEKAGI +IQ+
Sbjct:  502 LWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQP----------------------------RATTALQIALALRQETLDLEKAGIGMIQI 602

HSP 2 Score: 23.483 bits (49), Expect = 3.630e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  602 IDEPALREGLP 612
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BURP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=metE PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.630e-32
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQP                            R  T  QIALA++ E  DLEKAGI +IQ+
Sbjct:  502 LWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQP----------------------------RATTALQIALALRQETLDLEKAGIGMIQI 602

HSP 2 Score: 23.483 bits (49), Expect = 3.630e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  602 IDEPALREGLP 612
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BURP0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=metE PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.630e-32
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQP                            R  T  QIALA++ E  DLEKAGI +IQ+
Sbjct:  502 LWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQP----------------------------RATTALQIALALRQETLDLEKAGIGMIQI 602

HSP 2 Score: 23.483 bits (49), Expect = 3.630e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  602 IDEPALREGLP 612
[Close]
BLAST of CX290254 vs. ExPASy Swiss-Prot
Match: METE_BURMS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain SAVP1) GN=metE PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.630e-32
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYINENWFTID*PFEMETLFNINCCQFCRHETCYQIALAIKDEVEDLEKAGINVIQL 388
            L GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQP                            R  T  QIALA++ E  DLEKAGI +IQ+
Sbjct:  502 LWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQP----------------------------RATTALQIALALRQETLDLEKAGIGMIQI 602

HSP 2 Score: 23.483 bits (49), Expect = 3.630e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 
Query:  385 IDEAALREGLP 417
            IDE ALREGLP
Sbjct:  602 IDEPALREGLP 612
The following BLAST results are available for this feature:
BLAST of CX290254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_YERPP2.788e-3255.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN2.788e-3255.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE2.788e-3255.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA2.788e-3255.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP32.788e-3255.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS3.630e-3254.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP63.630e-3254.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP13.630e-3254.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP03.630e-3254.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMS3.630e-3254.265-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC02022B12SK IF1 Citrus clementina cDNA clone C02022B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290254 ID=CX290254; Name=CX290254; organism=Citrus clementina; type=EST; length=418bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCC
AATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TCAGAAATGACCAGCCCAGGTATATAAATGAGAACTGGTTCACTATTGAT
TAACCTTTTGAAATGGAAACATTGTTCAACATAAATTGCTGCCAATTTTG
CAGACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCG
AGGATCTTGAGAAGGCAGGCATTAACGTTATTCAATTGATGAGGCTGCCT
TGAGGGAAGGATTGCCTC
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