CX290263

Overview
NameCX290263
Unique NameCX290263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length743
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 77/125 (61.60%), Postives = 90/125 (72.00%), Query Frame = 1
Query:   10 TRIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            T  DG C+   +N K VTID YE+VP N+E ALQ AV  QPVSVA++  G AF+ Y SGIFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  218 TAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38
Identity = 77/125 (61.60%), Postives = 90/125 (72.00%), Query Frame = 1
Query:   10 TRIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            T  DG C+   +N K VTID YE+VP N+E ALQ AV  QPVSVA++  G AF+ Y SGIFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  218 TAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 76/126 (60.32%), Postives = 92/126 (73.02%), Query Frame = 1
Query:   10 TRIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            T  +G+CD  + N   V+ID +E+VP+NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG C T L+HGV  VGYGT  +G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM ASY
Sbjct:  218 TAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNIS-KKEGLCGIAMMASY 342          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.993e-37
Identity = 76/125 (60.80%), Postives = 93/125 (74.40%), Query Frame = 1
Query:   10 TRIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            T  +G+CDT ++NA VV+ID Y +VP NDEK+LQKAVANQPVSV ++  G  FQLY +GIFTG C  S +H  T  G  TEN  DYW VKNSWG +WGE GYIR+ERN+A + +GKCGIA+  SY
Sbjct:   92 TGTNGTCDT-KENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANHYRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAES-SGKCGIAISPSY 214          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 74/124 (59.68%), Postives = 91/124 (73.39%), Query Frame = 1
Query:   16 IDGSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            ++G CD   ++N K V ID YE++P NDE AL KAVA+QPV+  I+     FQLYESG+F G CGT+L+HGV  VGYGTENG DYW+VKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  228 VNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANP-RGLCGIAMRASY 350          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.399e-37
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 1
Query:   19 DGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            DG C++   NA VV+ID YE+VP ++E++LQKAVANQPVSV ++  G  FQLY SGIFTG C  S +H +T VGYGTEN  D+WIVKNSWG +WGE GYIR ERN+     GKCGI   ASY
Sbjct:   95 DGICNS-TVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENP-DGKCGITRFASY 214          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.292e-36
Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 1
Query:   19 DGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            +G+CD  + N   V+ID +E+VP NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG C T L+HGV  VGYGT  +G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM  SY
Sbjct:  221 EGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNIS-KKEGLCGIAMLPSY 342          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.203e-36
Identity = 72/124 (58.06%), Postives = 91/124 (73.39%), Query Frame = 1
Query:   16 IDGSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            ++G C+   +++ K V ID YE++P NDE AL KAVA+QPV+  ++     FQLYESG+F G CGT+L+HGV  VGYGTENG DYWIVKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  235 LNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANP-RGLCGIAMRASY 357          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.865e-35
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 1
Query:   19 DGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            +G C   +++ + VTI  YEDVP ND+++L KA+A+QPVSVAIE  G  FQ Y+ G+F G+CGT LDHGV AVGYG+  G+DY IVKNSWG  WGE G+IRM+RN  G   G CGI   ASY
Sbjct:  230 EGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRN-TGKPEGLCGINKMASY 350          
BLAST of CX290263 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.182e-35
Identity = 74/125 (59.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 GSCDTYR---KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 384
            G+C+  R    +  VV ID ++DVP N E+ L +AVANQPVSVA+E  G AF  Y  G+FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  228 GTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
The following BLAST results are available for this feature:
BLAST of CX290263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
ACTN_ACTCH6.850e-3861.60Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ACTN_ACTDE8.946e-3861.60Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CYSEP_VIGMU1.168e-3760.32Vignain OS=Vigna mungo PE=1 SV=1[more]
CPGP1_ZINOF1.993e-3760.80Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CPR3_ARATH2.603e-3759.68Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CPGP2_ZINOF3.399e-3761.48Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_PHAVU1.292e-3660.16Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CPR4_ARATH2.203e-3658.06Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
XCP1_ARATH1.865e-3558.20Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSP2_HORVU3.182e-3559.20Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionC02022C10SK IF1 Citrus clementina cDNA clone C02022C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290263 ID=CX290263; Name=CX290263; organism=Citrus clementina; type=EST; length=743bp
GAATTCGGCACGAGGATTGATGGTAGCTGTGACACATATCGGAAAAATGC
CAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAGA
AAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCCATTGAA
GGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAG
ATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAG
AAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGG
GGAGAGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCAC
GGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCC
AAAATCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCT
GCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTG
TGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTG
AGGCTGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTAT
CCCATCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCC
ATTGGGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTC
ATGGAAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGC
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