CX290271

Overview
NameCX290271
Unique NameCX290271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.534e-52
Identity = 101/191 (52.88%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH E VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_PELTS (S-adenosylmethionine synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.004e-52
Identity = 100/191 (52.36%), Postives = 132/191 (69.11%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            ++ISTQH   VT DEI + + EHV+KPV+P ++LD  T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDPTKVDRS +Y  R  AK+IVA GLA +C  QV+YAIGV  P+S+ VD++GTG++ ++ ++K+VKE FD RP  +   LDL+R     + + + YGHFGR+D D  WE
Sbjct:  195 IVISTQHHPRVTLDEIRSGVLEHVVKPVVPPEFLDGSTRFFVNPTGRFVIGGPQGDTGLTGRKIIVDTYGGMARHGGGSFSGKDPTKVDRSASYAARYVAKNIVAAGLAEKCEFQVAYAIGVAHPVSMMVDTFGTGRVDEQTLVKLVKEHFDLRPAAIIKELDLRR---PIYRQVSVYGHFGRNDLDLPWE 382          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.004e-52
Identity = 102/203 (50.25%), Postives = 136/203 (67.00%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 611
            +++S QH   +T ++I  D+KE VIKPV+P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE        K QA
Sbjct:  198 IVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWERTDKAALLKEQA 397          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.617e-52
Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 602
            V+ISTQH   ++ +++  +L E VIK VIP   +D  T++HLNP G FV+GGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AKS+V  GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV ++FD RPGM+  NLDLKR     +  TA  GHFG +  DF WE  + LK +K
Sbjct:  191 VVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKR---AIYEPTAENGHFGHN--DFPWEQARKLKIDK 385          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAAR (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MRSA252) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.418e-52
Identity = 100/191 (52.36%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAAN (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain N315) GN=metK PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.418e-52
Identity = 100/191 (52.36%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAAM (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metK PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.418e-52
Identity = 100/191 (52.36%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.418e-52
Identity = 100/191 (52.36%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAA2 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH1) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.418e-52
Identity = 100/191 (52.36%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STAA1 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.418e-52
Identity = 100/191 (52.36%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            +++STQH + VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D  F WE
Sbjct:  197 IVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384          
The following BLAST results are available for this feature:
BLAST of CX290271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAA31.534e-5252.88S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_PELTS2.004e-5252.36S-adenosylmethionine synthetase OS=Pelotomaculum t... [more]
METK_GEOKA2.004e-5250.25S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK5_CAEEL2.617e-5254.00Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_STAAR3.418e-5252.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAN3.418e-5252.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAM3.418e-5252.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA93.418e-5252.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA23.418e-5252.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA13.418e-5252.36S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionC02022D06SK IF1 Citrus clementina cDNA clone C02022D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290271 ID=CX290271; Name=CX290271; organism=Citrus clementina; type=EST; length=706bp
GGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTA
CCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTTTTGTCA
TTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATC
GACACTTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAA
AGACCCTACTAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTG
CTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTC
TCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATA
TGGAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAA
GCTTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGG
GGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAG
GGATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAA
AGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTC
AAGTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTG
CTGCTT
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