CX290271

Overview
NameCX290271
Unique NameCX290271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.303e-55
Identity = 105/191 (54.97%), Postives = 140/191 (73.30%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            V++S QH   V++  I  D+ EHVIK VIP + +D  TIF++NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS +Y++R  AK+IVA GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K++FD RP  +  +LDL+R     + KTAAYGHFGR+D +FTWE
Sbjct:  195 VVVSAQHHPEVSSATIEKDIIEHVIKAVIPPEMIDAHTIFYVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.303e-55
Identity = 115/200 (57.50%), Postives = 139/200 (69.50%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDP----DFTWEVVKPL 590
            VLIS QHDE VTND+I+ DL E VIK VIP   LD +T + LNPSGRFV GGPHGDAGLTGRKII+DTY             KDP+KVDRS AY  R  AKSIVA GLARRC+VQ++YAIGV EPLS+ V++YGTGK  D ++L+IVK++F  RP  +   L+L+R     +  T+ +GHFGR D      FTWEV K +
Sbjct:  194 VLISAQHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNPSGRFVRGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNFKLRPYDIIQELNLRR---PIYYDTSRFGHFGRKDELGTGGFTWEVPKKM 390          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.314e-55
Identity = 105/191 (54.97%), Postives = 137/191 (71.73%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            VLIS QH ETV+ND+I  DL  HVIK VIP + LDE+T  ++NP+GRFVIGGP GD GLTGRKIIIDTY             KDPTKVDRS AY  R  AK+IVA GLA +C ++++YAIG+  PLS+F+D++GTGK+ +++++++V + FD RPG +  +LDL++     + K AAYGHFGR D D  WE
Sbjct:  195 VLISAQHCETVSNDKIREDLINHVIKEVIPAELLDEETKIYINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPGAIIRDLDLRK---PLYKKVAAYGHFGRTDIDLPWE 382          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.314e-55
Identity = 109/191 (57.07%), Postives = 136/191 (71.20%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            V++STQH   VT+ +I AD+ EHVIKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +L+L+R     + + AAYGHFGR+D D  WE
Sbjct:  194 VVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGREDLDLPWE 381          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.358e-55
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  192 IVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.358e-55
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  192 IVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.610e-55
Identity = 105/191 (54.97%), Postives = 138/191 (72.25%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            V+ISTQH   V++D I  D+ EHVI PVIP + LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA+G+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V + FD RP  +   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  195 VVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.639e-54
Identity = 104/193 (53.89%), Postives = 138/193 (71.50%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 581
            ++ISTQH E VT D+I  D+++HVI P++P   LD++T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++GTGK+P+ ++++ V+++FD RP  +   LDLKR     + +TAAYGHFGR D    WE V
Sbjct:  197 IVISTQHAEDVTLDQIQEDIRKHVIDPIVPASLLDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGFARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEPVSISIDTFGTGKVPESKLVEAVRDNFDLRPAGIIKMLDLKR---PIYKQTAAYGHFGRTDVALPWERV 386          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.229e-54
Identity = 101/191 (52.88%), Postives = 135/191 (70.68%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 575
            ++ISTQH   + +D+I  D+KEHVIKP++P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  198 IVISTQHHPEIEHDQIERDMKEHVIKPIVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDVLIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLPWE 385          
BLAST of CX290271 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.388e-53
Identity = 101/203 (49.75%), Postives = 139/203 (68.47%), Query Frame = 3
Query:    3 VLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 611
            +++S QH   +T ++I  D+KEHVIKP++P + +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE     +  K QA
Sbjct:  198 IVVSAQHHPEITQEQIERDIKEHVIKPIVPAELIDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWERTDKAETLKEQA 397          
The following BLAST results are available for this feature:
BLAST of CX290271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SYNWW3.303e-5554.97S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_LEIIN3.303e-5557.50S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_CLOD64.314e-5554.97S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_ANATD4.314e-5557.07S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_CLOPS7.358e-5556.02S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP17.358e-5556.02S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOCE9.610e-5554.97S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_STACT1.639e-5453.89S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_GEOTN6.229e-5452.88S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_GEOSW1.388e-5349.75S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]

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Properties
Property NameValue
Genbank descriptionC02022D06SK IF1 Citrus clementina cDNA clone C02022D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290271 ID=CX290271; Name=CX290271; organism=Citrus clementina; type=EST; length=706bp
GGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTA
CCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTTTTGTCA
TTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATC
GACACTTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAA
AGACCCTACTAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTG
CTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTC
TCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATA
TGGAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAA
GCTTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGG
GGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAG
GGATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAA
AGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTC
AAGTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTG
CTGCTT
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