CX290278

Overview
NameCX290278
Unique NameCX290278
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57
Identity = 115/241 (47.72%), Postives = 150/241 (62.24%), Query Frame = 1
Query:    4 FGTRLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRR---QPSAEFSYRDVEALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPY-LXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYGTSKGSDY 714
            F   L+ I+ RN E  SY LGL  FAD+S  E+K    G  P+ P        S  +     + LPKSVDWR +GAVT VK+QG C SCWAFSTV AVEG+N+IV+G L +LSEQ+LI+C+   NNGC GG ++ A+++I+ +GGL  + DYPY                   I GY+++P NDE +L+KA+AHQPV+  I++S  +FQ Y  GVF G CG  L+HGV  VGYGT  G DY
Sbjct:   73 FEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGSCGTNLNHGVVVVGYGTENGRDY 312          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.379e-56
Identity = 111/239 (46.44%), Postives = 150/239 (62.76%), Query Frame = 1
Query:    4 FGTRLKHIDQRNKEVT-SYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVEALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFN-NGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYGTSKGSDY 714
            F   L+ ID+ N +   SY +GLN+FAD++ EEF++ YLG       + + S  +  R  + LP  VDWR  GAV  +K+QG CG CWAFS +A VEGIN+IV+G L SLSEQELIDC  + N  GCNGG +   F++I+ +GG++ EE+YPY                  I  Y++VP N+E +L  A+ +QPVSV ++A+G  F+ YS G+FTGPCG  +DH V  VGYGT  G DY
Sbjct:   66 FKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSG-SNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDY 303          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.073e-56
Identity = 116/231 (50.22%), Postives = 146/231 (63.20%), Query Frame = 1
Query:    4 FGTRLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVEA-LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYG 693
            F   LK+ID+ NK+  SYWLGLN FADMS++EFK KY G      T  + S E    D +  +P+ VDWR+KGAVTPVKNQGSCGSCWAFS V  +EGI +I +GNL   SEQEL+DCD   + GCNGG   ++   +VA  G+H    YPY                    G + V   +E +LL ++A+QPVSV +EA+G DFQ Y GG+F GPCG ++DH VAAVGYG
Sbjct:   72 FKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGG-YPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYG 300          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 215.312 bits (547), Expect = 2.602e-55
Identity = 110/239 (46.03%), Postives = 149/239 (62.34%), Query Frame = 1
Query:    4 FGTRLKHIDQRNKEVT-SYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVEALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFN-NGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYGTSKGSDY 714
            F   L+ ID+ N +   SY +GLN+FAD++ EEF++ YL        + + S  +  R  + LP  VDWR  GAV  +K+QG CG CWAFS +A VEGIN+IV+G L SLSEQELIDC  + N  GCNGG +   F++I+ +GG++ EE+YPY                  I  Y++VP N+E +L  A+ +QPVSV ++A+G  F+ YS G+FTGPCG  +DH V  VGYGT  G DY
Sbjct:   66 FKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSG-SNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDY 303          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.977e-51
Identity = 102/239 (42.68%), Postives = 151/239 (63.18%), Query Frame = 1
Query:    4 FGTRLKHIDQRN-KEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVEALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYG-TSKGSDY 714
            F   +KHI+  N +   SY LG+N+F DM+  EF  +Y G+       R+P   F   ++ A+P+S+DWR  GAV  VKNQ  CGSCW+F+ +A VEGI +I +G L SLSEQE++DC  S+  GC GG ++ A+ +I+++ G+  EE+YPYL                 I+GY  V  NDE+S++ A+++QP++  I+AS  +FQ+Y+GGVF+GPCG  L+H +  +GYG  S G+ Y
Sbjct:   61 FKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPYL-AYQGTCNANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDAS-ENFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKY 295          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.888e-51
Identity = 97/176 (55.11%), Postives = 124/176 (70.45%), Query Frame = 1
Query:  187 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYGTSKGSDY 714
            LP S+DWR+ GAV PVKNQG CGSCWAFSTVAAVEGINQIV+G+L SLSEQ+L+DC T+ N+GC GG M+ AF++IV +GG++ EE YPY                  I  Y++VP ++EQSL KA+A+QPVSV ++A+G DFQ Y  G+FTG C    +H +  VGYGT    D+
Sbjct:    3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNNGGINSEETYPY-RGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDF 176          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.332e-50
Identity = 96/176 (54.55%), Postives = 121/176 (68.75%), Query Frame = 1
Query:  187 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYGTSKGSDY 714
            LP  VDWR KGAV  +KNQ  CGSCWAFS VAAVE IN+I +G L SLSEQEL+DCDT+ ++GCNGG M+ AF+YI+ +GG+  +++YPY                  I+G+Q V  N+E +L  A+A QPVSV +EA+GA FQ YS G+FTGPCG   +HGV  VGYGT  G +Y
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNGGIDTQQNYPY--SAVQGSCKPYRLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNY 173          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.786e-49
Identity = 106/244 (43.44%), Postives = 140/244 (57.38%), Query Frame = 1
Query:    1 EFGTRLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYR---DVEALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSF-NNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGP-CGAE-LDHGVAAVGYGTSKGSDY 714
            EF   + ++   N + +   LGLN+ AD+S+EE++  YLG +               R        P +VDWR+K AVTPVK+QG CGSC++FST  +VEG+  I +G L SLSEQ ++DC +SF N GCNGGLM  AF+YI+ + GL+ EE YPY                  I+ Y+++   DE  L  AL   PVSV I+AS   FQ Y+ GV+  P C +E LDHGV AVG GT  G DY
Sbjct:   56 EFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDY 299          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.106e-49
Identity = 95/231 (41.13%), Postives = 143/231 (61.90%), Query Frame = 1
Query:    4 FGTRLKHIDQ-RNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVEALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYG 693
            F   + HI+   N+   SY LG+N+F DM++ EF  +Y GL      +R+P   F   D+ ++P+S+DWR  GAVT VKNQG CGSCWAF+++A VE I +I  GNL SLSEQ+++DC  S+  GC GG ++ A+ +I+++ G+     YPY                  I+ Y  V  N+E++++ A+++QP++  ++ASG +FQ Y  GVFTGPCG  L+H +  +GYG
Sbjct:   61 FKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFIISNKGVASAAIYPY-KAAKGTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDASG-NFQHYKRGVFTGPCGTRLNHAIVIIGYG 287          
BLAST of CX290278 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.862e-48
Identity = 90/168 (53.57%), Postives = 117/168 (69.64%), Query Frame = 1
Query:  190 PKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLXXXXXXXXXXXXXXXXXISGYQDVPENDEQSLLKALAHQPVSVGIEASGADFQFYSGGVFTGPCGAELDHGVAAVGYG 693
            P+S+DWR+KGAVTPVKNQ  CGSCWAFSTVA +EGIN+I++G L SLSEQEL+DC+   ++GC+GG    + +Y+V   G+H E +YPY                  I+GY+ VP NDE SL++A+A+QPVSV  ++ G  FQFY GG++ GPCG   DH V AVGYG
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR-SHGCDGGYQTPSLQYVV-DNGVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGYG 167          
The following BLAST results are available for this feature:
BLAST of CX290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CPR3_ARATH1.248e-5747.72Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ACTN_ACTDE1.379e-5646.44Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
PAPA1_CARPA3.073e-5650.22Papain OS=Carica papaya PE=1 SV=1[more]
ACTN_ACTCH2.602e-5546.03Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
BROM1_ANACO2.977e-5142.68Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CPGP2_ZINOF3.888e-5155.11Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
ERVB_TABDI7.332e-5054.55Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP3_DICDI2.786e-4943.44Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
ANAN_ANACO8.106e-4941.13Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
MEX1_JACME6.862e-4853.57Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02022E01SK IF1 Citrus clementina cDNA clone C02022E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290278 ID=CX290278; Name=CX290278; organism=Citrus clementina; type=EST; length=719bp
GAATTCGGCACGAGGTTGAAGCATATTGATCAGAGGAACAAAGAGGTCAC
TAGCTATTGGCTTGGTTTGAATGAGTTTGCAGACATGAGCCACGAAGAGT
TCAAGAACAAATATTTAGGATTGAAACCTCAGTTCCCCACGAGGAGACAG
CCTTCTGCCGAGTTTAGCTATAGAGATGTCGAAGCTTTGCCGAAATCTGT
TGATTGGAGGAAGAAAGGAGCTGTTACTCCTGTCAAGAACCAAGGTTCAT
GTGGTAGTTGTTGGGCATTTTCAACTGTTGCAGCTGTGGAAGGCATCAAC
CAGATAGTCTCAGGAAATCTAACTTCATTGTCCGAACAAGAGTTGATTGA
TTGCGACACAAGTTTCAACAATGGCTGCAATGGAGGTCTAATGGATTATG
CATTCAAATATATAGTTGCAAGTGGAGGACTCCACAAGGAAGAAGACTAC
CCATATCTTATGGAGGAAGGCACTTGTGAGGAAAAGAAGGAAGAGATGGA
GGTAGTGACAATCAGTGGCTACCAAGATGTGCCAGAAAACGATGAACAAA
GTCTCTTGAAAGCACTGGCTCACCAGCCTGTTAGTGTAGGCATCGAGGCT
TCTGGCGCAGACTTCCAATTTTACAGTGGGGGTGTATTCACTGGGCCTTG
TGGAGCTGAGCTCGATCACGGCGTTGCTGCAGTTGGATATGGAACATCAA
AGGGTTCAGATTACATCAT
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