CX290321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11 Identity = 55/186 (29.57%), Postives = 85/186 (45.70%), Query Frame = 1 Query: 25 NRIQGSILVPPPSTKVLLVSN------NKLSGKIPPXXXXXXXXXXXXXXXXXXX-GTIPPCLGNFSTELITLHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNSNITFPFQALRIIDLSHNEFTGFLPRRI 561 N GS P +T LL +N NKL+G +P G IP L + T L +HL+NN + G+I ++ S +R LDL+ N+ +G LP L+V+N+ N +S S P + + L L + N F GPL SN++ A + S+N+ +G +P + Sbjct: 396 NHFTGSF---PDATPQLLRANHLNLSYNKLTGSLPERIPTHYPKLRVLDISSNSLEGPIPGALLSMPT-LEEIHLQNNGMTGNIGPLPSSGSRIRLLDLSHNRFDGDLPGVFGSLTNLQVLNLAANNLSGSLPSSMNDIVSLSSLDVSQNHFTGPL-PSNLSSNIMAFNV---SYNDLSGTVPENL 573
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11 Identity = 46/152 (30.26%), Postives = 72/152 (47.37%), Query Frame = 1 Query: 172 GTIPPCLGNFSTELITLHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNS-----------------NITFPFQALRI-----IDLSHNEFTGFLPRRI 561 G +P + N S +L+TL L + G I N +L+ L L+ N L GPLP SL K + L +++ N +S P ++G++ L+ L L +N F G + S N T P + ++I +D+S N G LP+ I Sbjct: 350 GDLPISIANLSAKLVTLDLGGTLISGSIPYDIGNLINLQKLILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAFIGNMTMLETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGTIPLEIMKIQQLLRLDMSGNSLIGSLPQDI 501 HSP 2 Score: 67.781 bits (164), Expect = 7.513e-11 Identity = 57/228 (25.00%), Postives = 97/228 (42.54%), Query Frame = 1 Query: 73 LLVSNNKLSGKIPPXXXXXXXXXXXXXXXXXXXGTIPPCLGNFSTELITLHLKNNSLEGHIHDTFANASHLRS------------------------LDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNSNITFPFQALRIIDLSHNEFTGFLPRRIFPSMEAMKNV-----DEQGRLEYMGGAFYDESITVAMQGHD 669 L++ N LSG +P G IP +GN T L TL L NN EG + + N SHL LD++ N L G LP+ + L +++G N +S P LG+ ++ L L N FYG + + ++ +DLS+N+ +G +P F S ++ + + +G++ G ++ + TV++ G++ Sbjct: 390 LILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAFIGNM-TMLETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGTIPLEIMKIQQLLRLDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGNLFYGDIPDLK---GLVGVKEVDLSNNDLSGSIP-EYFASFSKLEYLNLSFNNLEGKVPVKG--IFENATTVSIVGNN 610
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.373e-11 Identity = 51/186 (27.42%), Postives = 77/186 (41.40%), Query Frame = 1 Query: 73 LLVSNNKLSGKIPPXXXXXXXXXXXXXXXXXXXGTIPPCLGNFST-----------------------ELITLHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNSNITFPFQALRIIDLSHNEFTGFLPRRI 561 L VSNN LSG IP G + +GN + L++++L+ N G + ++F L SL L+ N L G +P+SL C L +N N +S+ P LGSL L L L N+ G + + L ++DLS+N+ TG +P + Sbjct: 393 LRVSNNSLSGMIPSGIWGLPNLQFLDLASNYFEGNLTGDIGNAKSLGSLDLSNNRFSGSLPFQISGANSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLGSLKLLNSLNLSGNKLSGMI---PVGLSALKLSLLDLSNNQLTGSVPESL 575
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 50/183 (27.32%), Postives = 88/183 (48.09%), Query Frame = 1 Query: 70 VLLVSNNKLSGKIPPXXXXXXXXXXXXXXXXXXXGTIPPCLGNFSTELITLHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKL---------EVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNSNITFPFQALRIIDLSHNEFTGFLPRRIFPSMEAMKNV 591 VL +S+N LSG +P G++P G+ ++ + L +N G I +F + LRSL+L+ N LEGP+P ++ +L E++++ N ++ P +G++ ++K+L L +N+ G L + L +DLS+N F G +P ++ PS NV Sbjct: 368 VLDLSSNNLSGSLPNFTSAFSRLSVLSIRNNSVSGSLPSLWGD--SQFSVIDLSSNKFSGFIPVSFFTFASLRSLNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSD--LNKLSGLLFLDLSNNTFKGQIPNKL-PSQMVGFNV 545
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 196 NFSTELITLHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNSNITFPFQALRIIDLSHNEFTGFLP 552 N ++++TL L N+ L G I + L+SLDL++N GPLP S +L +++ NMIS P +G LH L L L N G L +N+ + L ++ L +N F+G +P Sbjct: 63 NNDSKVLTLSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKL-PTNLA-SLRNLTVVSLENNYFSGEIP 179
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 41/128 (32.03%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 190 LGNFSTELIT------LHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYGPLCNSNITFPFQALRIIDLSHNEFTGFLPR 555 LG+ + +L + L L +N G + D+ NA+ L+S+ L SN L G LP+S+ L+++N+ N + P + L L ++ L N F G +I F+A +I+DLS N G LP+ Sbjct: 92 LGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSG-----DIPSGFEAAQILDLSSNLLNGSLPK 214
BLAST of CX290321 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 52/182 (28.57%), Postives = 81/182 (44.51%), Query Frame = 1 Query: 22 NNRIQGSI---LVPPPSTKVLLVSNNKLSGKIPPXXXXXXXXXXXXXXXXXXXGTIPPCLGNFSTELITLHLKNNSLEGHIHDTFANASHLRSLDLNSNKLEGPLPRSLAKCIKLEVVNVGKNMISDSFPCWLGSLHELKILVLRSNRFYG--PLCNSNITFPFQALRIIDLSHNEFTGFLP 552 NN++ G I P +L +S+N +G IP G+IP +G+ + +I + N G I ++ L LDL+ N+L G +PR L L +N+ N +S P +G L L L L SN+F G PL N+ L +++LS+N +G +P Sbjct: 412 NNKLSGQIPHGFWGLPRLSLLELSDNSFTGSIPKTIIGAKNLSNLRISKNRFSGSIPNEIGSLNG-IIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNL-----KLNVLNLSYNHLSGKIP 587 The following BLAST results are available for this feature:
BLAST of CX290321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290321 ID=CX290321; Name=CX290321; organism=Citrus clementina; type=EST; length=763bpback to top |