CX290353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP36_DROME (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila melanogaster GN=Usp36 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 59/186 (31.72%), Postives = 84/186 (45.16%), Query Frame = 1 Query: 73 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 621 L IFGG L+S V+ N S T Q F L LDI ++EDA + E LE G V+A K ++ L + L RFS KL K + F ++ L + + +A+ + Y LV+ VTH G GHYTA + +FDD+ V I V + AY++F+ Sbjct: 297 LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI--RKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP21_MOUSE (Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 63/192 (32.81%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 67 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 621 S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYTA R W ++D+ V+ + ++V + YVLFY Sbjct: 369 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFY 556
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP11_HUMAN (Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 172 IYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATVTHHG--RDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYNK 627 + +A +++ + LF+ E LE Y S + A K + + L +ILI+HL RFSY KL V FP++ + + ++ P E KY+L+A H+G RD GHYT A + QW +FDD SV+ + +++ AYVLFY + Sbjct: 773 VMKKAPVRLQECIELFTTVETLEKENPWYCPSCKQHQ---LATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRD---GHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQR 929
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP9_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 9 OS=Schizosaccharomyces pombe GN=ubp9 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12 Identity = 63/198 (31.82%), Postives = 91/198 (45.96%), Query Frame = 1 Query: 64 PSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS---KVLHDQ-----AYVLFY 621 P + +F G L S K ++ + FL L +DI + ++ LR FSA E L + A+K +KI+ L KIL LHL RF Y +G KL ++ F ++ L +AE R Y L + + H G P +GHY + R W+ FDD +VT + + + DQ AYVLFY Sbjct: 227 PKWVHSLFEGTLTSETKCLTCENITSRDESFLDLSIDIENHT--SVTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTEDAENAE-RMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQRFFGDQPGQATAYVLFY 421
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP21_RAT (Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus GN=Usp21 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12 Identity = 62/192 (32.29%), Postives = 86/192 (44.79%), Query Frame = 1 Query: 67 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 621 S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + Y+L A H G GHYTA R W ++D+ V+ + ++V + YVLFY Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGD--FASDKVGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFY 555
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP12_YEAST (Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae GN=UBP12 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12 Identity = 55/163 (33.74%), Postives = 78/163 (47.85%), Query Frame = 1 Query: 181 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK------KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYNKFRRLQD 645 E T++D L+LFS PE L T + T K K +++ IL++HL RF S K+ +V FP+ L L R ++ G Y+L A H+G GHYTA + F D +W +FDD+ VT + AY+LFY RR +D Sbjct: 959 ERTITLDDCLQLFSKPEIL-----GLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYG-GLGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFY--IRRHKD 1113
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP11_MOUSE (Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11 Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 196 IEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATVTHHG--RDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYNK 627 +++ ++LF+ E LE + SS + T K + + L ++LI+HL RFS+ KL V+FP++ + + ++ P E KY+L+A H+G RD GHYT A + QW + DD SV+ + +++ AYVLFY + Sbjct: 740 LKECIKLFTTVETLEKENPWYCSSCKQHQLAT--KKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVIKPKNESSPDLYKYDLIAVSNHYGGMRD---GHYTTFACNKDSGQWHYLDDNSVSPVNENQIESKAAYVLFYQR 888
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP5_ARATH (Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana GN=UBP5 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11 Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 1 Query: 283 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYNK 627 A K + + L ++L++HL RFSY KL V FP+ L L + + ++ + YEL A H+G GHYTA + +D +W +FDD+ ++ I V AYVLFY + Sbjct: 800 ASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYG-GMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP8_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 8 OS=Schizosaccharomyces pombe GN=ubp8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11 Identity = 55/184 (29.89%), Postives = 88/184 (47.83%), Query Frame = 1 Query: 82 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYNK 627 IF G LK+VV K V P + + LDI T++ L F + E ++ Y S G+ + K + L + + L RF + STK+ K V +P L + + + + Y+L + V H G + GHY A Y+ +QW DD ++ + S+VL+ QAY+LFY++ Sbjct: 264 IFSGSLKNVVTCLDCKKERVAVDPLMDISLDINEP---TLQGCLERFVSKEKVQ-YSCHSCGSKNAI---KQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVSYPAFLRMRYNF----NQDDVDYQLYSVVCHKGTLDT-GHYIAYT-YYQNQWFLLDDTTIVEVKESEVLNSQAYLLFYHE 434
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP50_MACFA (Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca fascicularis GN=USP50 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11 Identity = 59/190 (31.05%), Postives = 86/190 (45.26%), Query Frame = 1 Query: 67 SALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT--SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYN 624 S ++ +F GQL S+V + K + + F +L L I SE +++D L+ F + L S TA ++ I KI+I HL RF KL + +PL + + + KY L A V H G D GHYTA + F W FDD V+ I + V + AY+LFY+ Sbjct: 175 SVITQLFEGQLNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFCETKQETAVRA-GISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYICPIFRKYPKYNLCAVVNHFG-DLDGGHYTAFCKNSFTQAWYSFDDTRVSEIPDTSVQNATAYLLFYS 362 The following BLAST results are available for this feature:
BLAST of CX290353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290353 ID=CX290353; Name=CX290353; organism=Citrus clementina; type=EST; length=736bpback to top |