CX290408

Overview
NameCX290408
Unique NameCX290408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.130e-45
Identity = 92/228 (40.35%), Postives = 135/228 (59.21%), Query Frame = 2
Query:   20 KYVKHNERRDKLTKTIMAEH-TLARQKGGGAAKPHFVDALLNLQEEYE--LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            K  K +   D++ + I+ EH    R      A    VD LL  Q+E E  L+DD I  ++ ++ I G +T++  VEW M+ELI+NPRV ++AQ E+ +V      + E +   L YL+ ++KE+MRLHPP PL++P  +    +I+GY +P  + + +N WAIGR+P  W     F+PERFL   ID +G D+  +PFG+GRRICPGI   I  +   L  LL+HF W
Sbjct:  247 KLEKVHRVTDRVLQDIIDEHKNRNRSSEEREAVEDLVDVLLKFQKESEFRLTDDNIKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVMEEAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDW 474          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.394e-45
Identity = 82/197 (41.62%), Postives = 132/197 (67.01%), Query Frame = 2
Query:  125 VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED--IDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKG 709
            +D +L+ Q++ E++DD ++ ++ N+ +A ++TT  ++EW +AEL+ +  +Q K +EE+D+V+GP   +TE D + L YLQ V+KE++RL    PL++PH    D K+ G+++P  S + VN W +  +PA WK P EFRPERFLEE+  ++  G+D+R LPFG GRR CPGI L + ++   +G L+ +F   P  G
Sbjct:  279 IDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG 475          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.044e-45
Identity = 83/197 (42.13%), Postives = 131/197 (66.50%), Query Frame = 2
Query:  125 VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED--IDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKG 709
            +D +L+ Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+K + ELD ++GP   +TE D   L YL  VVKE++RL    PL++PH    D K+ G+++P  S + VN W +  +PA WKNP EFRPERFLEE+  ++  G+D+R LPFG GRR CPGI L + ++   LG L+ +F   P  G
Sbjct:  279 IDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG 475          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.202e-44
Identity = 90/223 (40.36%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   47 DKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQE----EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFL---EEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            D + K    E    ++ G        +D LL++ E    E +L    I   + ++ +AG DT+ +++EWAMAELI NP V +KA++E+D VVG +R++ E+D  NL YLQ +V+E++RLHP  PL++   + + V + GY++P  + + VNVWAIGRDP  W+ P EFRPERF+   +  +D++G  Y  +PFGSGRR CPG  L   +V   L  ++  F W
Sbjct:  249 DGIIKQRQEERRKNKETGTAKQFKDMLDVLLDMHEDENAEIKLDKKNIKAFIMDIFVAGTDTSAVSIEWAMAELINNPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVVRESSKSAV-VCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQW 470          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.569e-44
Identity = 83/197 (42.13%), Postives = 130/197 (65.99%), Query Frame = 2
Query:  125 VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEE--DIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKG 709
            +D +L+ Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+K + ELD ++GP   +TE D   L YL  VVKE++RL    PL++PH    D K+ G+++P  S + VN W +  +PA WKNP EFRPERFLEE   ++  G+D+R LPFG GRR CPGI L + ++   LG L+ +F   P  G
Sbjct:  279 IDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG 475          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.569e-44
Identity = 93/225 (41.33%), Postives = 132/225 (58.67%), Query Frame = 2
Query:   41 RRDKLTKTIMAEHTLARQKGGGAA-KPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLM-LPHKANADVKI-SGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEE----DIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            R     + ++ +H L R     AA    FVD LL+L+    L++D ++ +LW MI  G DTT +  EW MAE+++NP VQ + + E+D  VG +   ++ D   + YLQ VVKE++R HPP PL+     A ADV + +G  VP G+   VN+WAI  D   W +P  F PERF+      D+D++G D RL PFG+GRR+CPG  LG+  VT  +  L+H F W
Sbjct:  294 RVQAFVRGVIRDHRLRRDSSSTAADNADFVDVLLSLEAHENLAEDDMVAVLWEMIFRGTDTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDW 518          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.569e-44
Identity = 84/221 (38.01%), Postives = 138/221 (62.44%), Query Frame = 2
Query:   47 DKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPL-EFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            DK  + ++ +H       G      FVD LL +Q +    +E++  +I  ++ N+ + G DT++  +EWAM EL+++P+  ++ QEE+  +      ++E + QN+ YL+ V+KE++RLHPP PLM+PH++  DV++  +++P G+ V +N WAIGR+ A W   + EFRPER L+  +D +G  + L+PFGSGRRICP I   + L   +L +L+H F W
Sbjct:  239 DKFFERVVQDHV-----DGNRDMTDFVDVLLAIQRDKTVGFEINRVSIKAIVMNVFVGGTDTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDW 454          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.050e-44
Identity = 83/197 (42.13%), Postives = 129/197 (65.48%), Query Frame = 2
Query:  125 VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED--IDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKG 709
            +D +L  +E+ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q K + ELD  +GP   +TE D QNL YLQ VVKE++RL    PL++PH    D K+ G+++P  S + VN W +  +P  WK P EFRPERFLEE+  ++  G+D+R LPFG GRR CPGI L + ++   +G L+ +F   P  G
Sbjct:  279 IDHILEAKEKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQAKLRHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG 475          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.677e-44
Identity = 82/197 (41.62%), Postives = 129/197 (65.48%), Query Frame = 2
Query:  125 VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED--IDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKG 709
            +D +L  Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+K ++EL+ V+GP   +TE D   L YLQ V+KE++RL    PL LPH    D K+ GY++P  S + VN W +  +P  WK P EFRPERFLEE+  ++  G+D+R LPFG GRR CPGI L + ++   +G L+ +F   P  G
Sbjct:  279 IDHILEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG 475          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.496e-44
Identity = 84/183 (45.90%), Postives = 124/183 (67.76%), Query Frame = 2
Query:  149 EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRV-MTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            + ++L+ D + G++ ++ +AG+ T+  T+ WA+ EL++N +V +K QEE+   +G  +  +TE D  NLHY + VVKE  RLHP  P +LP +  + VKI GY++P  + + +NV+AI RDP  W NP EF P+RFL+  ID KG ++ LLPFGSGRRICPG+ +GI LV   L +LL+ F W
Sbjct:  281 DSFKLTTDHLKGMISDIFLAGVSTSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDW 463          
The following BLAST results are available for this feature:
BLAST of CX290408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C71DA_SOYBN4.130e-4540.35Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
TCMO_PEA5.394e-4541.62Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_POPTM7.044e-4542.13Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C93A1_SOYBN1.202e-4440.36Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
TCMO_POPKI1.569e-4442.13Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C78AB_ORYSJ1.569e-4441.33Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C71AQ_ARATH1.569e-4438.01Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
TCMO_HELTU2.050e-4442.13Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_CATRO2.677e-4441.62Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C71BT_ARATH3.496e-4445.90Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC02023H05SK IF1 Citrus clementina cDNA clone C02023H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290408 ID=CX290408; Name=CX290408; organism=Citrus clementina; type=EST; length=715bp
GTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAACGCAGAGATA
AGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCGTCAAAAGGGT
GGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCAATTTGCAAGA
GGAATATGAACTTAGTGATGATACAATTATTGGGCTACTTTGGAACATGA
TAATAGCAGGCATGGACACCACAACAATAACTGTAGAATGGGCAATGGCA
GAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCAGGAAGAACTAGA
CCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAGACTTTCAAAACC
TGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGGCTACACCCACCA
ACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGTAAAAATCAGCGG
CTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACGTTTGGGCCATAG
GCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTTAGGCCTGAGAGG
TTCTTAGAGGAGGACATTGACATGAAAGGACACGATTATCGATTGTTACC
ATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAACTTGGCATANATT
TAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTTTGGTGGGCACCG
GCTAAAGGAGTGAAG
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