CX290466

Overview
NameCX290466
Unique NameCX290466
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 60/176 (34.09%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP-----LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF--TGRCGTS-----LDHGVTAVGYGTEN--GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            LS QE+V C + Y +GC GG           + G+  E  +PY   D  C       +  +  +Y  V       N+     + V + P++VA E     F  Y++GI+  TG           +H V  VGYGT++  G DYWIVKNSWG+SWGE GY R+ R      T +C I
Sbjct:  283 LSSQEVVSC-SQYAQGCEGGFPYLTAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYS-SEYHYVGGFYGGCNEALMKLELVYHGPLAVAFEVYD-DFLHYQNGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTSWGEDGYFRIRRG-----TDECAI 450          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14
Identity = 60/174 (34.48%), Postives = 80/174 (45.98%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC---DTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF--TGRCGTS-----LDHGVTAVGYGTEN--GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            LS QE+V C + Y +GC GG           + G+  E  +PY   D  C   D +R  +             N+     + V + P++VA E     F  Y+ GI+  TG           +H V  VGYGT++  G DYWIVKNSWGS WGE GY R+ R      T +C I
Sbjct:  256 LSPQEIVSC-SQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCKPNDCFRYYSSEYYYVGGFYGACNEALMKLELVRHGPMAVAFEVYDDFFH-YQKGIYYHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRG-----TDECAI 422          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13
Identity = 59/176 (33.52%), Postives = 81/176 (46.02%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP-----LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF--TGRCGTS-----LDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            LS QE+V C + Y +GC GG           + G+  E+ +PY   D  C   ++        +Y  V       N+     + V   P++VA E     F  Y  G++  TG           +H V  VGYGT+  +G DYWIVKNSWG+SWGE GY R+ R      T +C I
Sbjct:  283 LSPQEVVSC-SQYAQGCEGGFPYLIAGKYAQDFGLVEEDCFPYTGTDSPC-RLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYD-DFLHYRKGVYHHTGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRG-----TDECAI 450          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13
Identity = 57/178 (32.02%), Postives = 80/178 (44.94%), Query Frame = 2
Query:    2 RAVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTE----EDYPYKAIDGSCDTYRKNAKVVTI---DDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGT-SLD-HGVTAVGYGT-ENGADYWIVKNSWGSSWGEAGYIRMERNV 505
            R   GI+K      +S S+Q L+ C    N GC+GG     + F+   G    E     DY +  +   C     +   + +     Y  V  +    +   VA  P+   I         YESG++    GT +L  H +  VGYGT ++G DYWI+KNSWG  WGE GY R+ R V
Sbjct:  118 RCAMGIDK----EAVSYSQQHLISCSLE-NFGCDGGDFQPTWSFLTFTGATTAECVKYVDYGH-TVASPCPAVCDDGSPIQLYKAHGYGQVSKSVPAIMGMLVAGGPLQTMIVVYA-DLSYYESGVYKHTYGTINLGFHALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVRGV 288          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 59/176 (33.52%), Postives = 81/176 (46.02%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP-----LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF--TGRCGTS-----LDHGVTAVGYGTEN--GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            LS QE+V C + Y +GC GG           + G+  E  +PY   D  C       +  +  +Y  V       N+     + V + P++VA E     F  Y+ GI+  TG           +H V  VGYGT++  G DYWIVKNSWG+ WGE GY R+ R      T +C I
Sbjct:  283 LSPQEVVSC-SQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYS-SEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYD-DFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRG-----TDECAI 450          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 59/176 (33.52%), Postives = 81/176 (46.02%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP-----LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF--TGRCGTS-----LDHGVTAVGYGTEN--GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            LS QE+V C + Y +GC GG           + G+  E  +PY   D  C       +  +  +Y  V       N+     + V + P++VA E     F  Y+ GI+  TG           +H V  VGYGT++  G DYWIVKNSWG+ WGE GY R+ R      T +C I
Sbjct:  283 LSPQEVVSC-SQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYS-SEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYD-DFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRG-----TDECAI 450          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATZ_HUMAN (Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR--------------KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM 493
            LS Q ++DC  + +  C GG    + DYA +      GI  E    Y+A D  CD +               +N  +  + DY  +    EK + +  AN P+S  I         Y  GI+     T+ ++H V+  G+G  +G +YWIV+NSWG  WGE G++R+
Sbjct:  118 LSVQNVIDCGNAGS--CEGGNDLSVWDYAHQH-----GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS-GREKMMAEIYANGPISCGIMATERLAN-YTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRI 275          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11
Identity = 55/192 (28.65%), Postives = 84/192 (43.75%), Query Frame = 2
Query:   50 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGS---------------------CDTYRKNAKVVTIDDYEDVPL-----NDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNV 505
            LS Q L+ CDT   +GC GG +D A+ F+    G+ ++  YP+   +                          +  N+ V   D Y+  P+     ND++ +++ + N PV   +E     F LY+ GI++      GR      HG  +V   G+G E   D     YW   NSWG +WGE G+ R+ R V
Sbjct:  254 LSPQNLLSCDTHQQQGCRGGRLDGAWWFL-RRRGVVSDHCYPFSGRERDEAGPAPPCMMHSRAMGRGKRQATAHCPNSYVNNNDIYQVTPVYRLGSNDKEIMKELMENGPVQALMEVHEDFF-LYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGV 443          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11
Identity = 56/182 (30.77%), Postives = 83/182 (45.60%), Query Frame = 2
Query:   44 ISLSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCG 532
            I LS Q ++DC  + +  C GG    + +YA +      GI  E    Y+A D  CD + +           TI +Y    + D       EK + +  AN P+S  I    M    Y  GI+      + ++H ++  G+G  N G +YWIV+NSWG  WGE G++R+   V  T  G  G
Sbjct:  118 ILLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATEMMSN-YTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI---VTSTYKGGTG 288          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 55/181 (30.39%), Postives = 78/181 (43.09%), Query Frame = 2
Query:   74 CDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDY------PYK---AIDGSCD-----------------TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD-HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            C +S   GC GG    A  +  D+ G+ T  DY      PY       G+C                   Y K+ K   +  Y  VP N      +  AN PV  A       F  Y+SG++    G  L  H +  +G+GTE+G+ YW+V NSWG +WGE+G+ ++ R        +CGI
Sbjct:  147 CGSSCGNGCEGGYPIQALRWW-DSKGVVTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKD-KHFGVSAYA-VPKNAASIQAEIYANGPVEAAFSVYE-DFYKYKSGVYKHTAGKYLGGHAIKIIGWGTESGSPYWLVANSWGVNWGESGFFKIYRG-----DDQCGI 318          
The following BLAST results are available for this feature:
BLAST of CX290466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CATC_MACFA7.550e-1434.09Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_CANFA7.550e-1434.48Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATC_BOVIN2.869e-1333.52Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATB1_GIALA3.747e-1332.02Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATC_PONAB6.391e-1333.52Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_HUMAN6.391e-1333.52Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATZ_HUMAN2.429e-1230.54Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1[more]
TINAL_HUMAN2.685e-1128.65Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
CATZ_MOUSE3.507e-1130.77Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
CPR1_CAEEL4.580e-1130.39Gut-specific cysteine proteinase OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionC02024E04SK IF1 Citrus clementina cDNA clone C02024E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290466 ID=CX290466; Name=CX290466; organism=Citrus clementina; type=EST; length=675bp
GAGGGCTGTACAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCAC
TATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGT
AATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGG
TATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTG
ACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGAT
GTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACC
CGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAAT
CGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACT
GCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAA
TTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTA
ACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCA
TATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCC
ATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTG
AGAGCAACACTTGCTGCTGTGTCTT
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