CX290466

Overview
NameCX290466
Unique NameCX290466
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.560e-43
Identity = 86/179 (48.04%), Postives = 124/179 (69.27%), Query Frame = 2
Query:    8 VQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT-YRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAM 541
            V+GI KI  G+L+ LSEQE++DC  SY  GC GG ++ A++FII N G+ T+E+YPY+A  G+C+  Y  N+  +T   Y  V  NDE  +  AV+NQP++  I+  G  FQ Y+ G+++G CG SL+H +T +GYG ++   YWIV+NSWGSSWG+ GY+R+ R+V+ +  G CGIAM
Sbjct:   35 VEGIYKIRKGNLVYLSEQEVLDCAVSY--GCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYIT--GYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRDS---YWIVRNSWGSSWGQGGYVRIRRDVSHS-GGVCGIAM 205          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.660e-43
Identity = 87/176 (49.43%), Postives = 117/176 (66.48%), Query Frame = 2
Query:    8 VQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 535
            ++GINKI+TG LISLSEQEL+DC+   + GC+GG    + ++++DNG + TE +YPY+   G C    K    V I  Y+ VP NDE +L +A+ANQPVSV  +  G  FQ Y+ GI+ G CGT+ DH VTAVGY    G  Y ++KNSWG +WGE GYIR++R  +G   G CG+
Sbjct:   34 IEGINKIITGQLISLSEQELLDCEYR-SHGCDGGYQTPSLQYVVDNG-VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGY----GKTYLLLKNSWGPNWGEKGYIRIKR-ASGRSKGTCGV 202          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.660e-43
Identity = 96/187 (51.34%), Postives = 122/187 (65.24%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I DNGGIDTE  YPY+A D SC     +   +     E    + E+ALQ+AV+   P+SVAI+    +FQ Y SG++  + C  T LDHGV AVGYGTE+  DYW+VKNSWGSSWG+AGYI+M RN        CGIA E SY
Sbjct:  138 ALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVE--VQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN----RDNNCGIASEPSY 318          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 89/182 (48.90%), Postives = 111/182 (60.99%), Query Frame = 2
Query:    8 VQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            V+GINKI TG L+ LSEQELVDC+   + GC GG   YA E++  NG I     YPYKA  G+C   +    +V       V  N+E  L  A+A QPVSV +E  G  FQLY+ GIF G CGT +DH VTAVGYG   G  Y ++KNSWG++WGE GYIR++R   G   G CG+   + Y
Sbjct:  166 VEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYVAKNG-IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKR-APGNSPGVCGLYKSSYY 344          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK-AIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            +V+G+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY+  ++  C  +++ +    I  Y+++   DE  LQ A+   PVSVAI+    +FQLY +G++     +S  LDHGV AVG GT+NG DY+IVKNSWG SWG  GYI M RN        CGI+  ASY
Sbjct:  153 SVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDEC-KFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARN----KDNNCGISTMASY 334          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.011e-42
Identity = 92/187 (49.20%), Postives = 122/187 (65.24%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPYKA+DG C    KN +  T   Y ++P   E+AL++AVAN+ PVSV I+    +F LY++G++    C  +++HGV  VGYG  +G DYW+VKNSWG  +G+ GYIRM RN        CGIA   SY
Sbjct:  147 ALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN-RAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSG----NHCGIANYPSY 328          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.320e-42
Identity = 94/187 (50.27%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G +    G L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGGID+EE YPY A D     Y+          + D+P   E+AL KAVA+  PVSVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E G  YWIVKNSWG  WG+ GYI M ++        CGIA  ASY
Sbjct:   33 ALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKD----RKNHCGIATAASY 215          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.252e-42
Identity = 94/188 (50.00%), Postives = 123/188 (65.43%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAID-GSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTENG-ADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            AV+GIN+I TG L+SLSEQEL+DCD    N GC GG   +AFEFI +NGGI ++E Y Y   D  +C     K  +VVTI+ +E VP+NDE +L+KAVA QP+SV I    M+   Y+SG++ G C     DH V  VGYGT +   DYW+++NSWG  WGE GY+R++RN     TGKC +A+   Y
Sbjct:  160 AVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMISAANMSD--YKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEP-TGKCAVAVAPVY 344          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 6.553e-42
Identity = 94/194 (48.45%), Postives = 117/194 (60.31%), Query Frame = 2
Query:   35 GSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTENGA-------------------DYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+N GIDTE  YPYKA +G C+ Y+      T+  Y+ V    E +L+ AV   PVSVAI+    +FQLY SGI +   C + +LDHGV AVGYG+ +G+                   +YWIVKNSWG+SWG  GYI M RN        CGIA  AS+
Sbjct:  154 GELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCE-YKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRN----RDNNCGIASSASF 341          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.558e-42
Identity = 91/187 (48.66%), Postives = 121/187 (64.71%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            +++G + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF++I  N GIDTE  YPY+A DGSC  +  N+   T   + ++    E  LQ+AV +  P+SV I+    +FQ Y SG++    C  S LDH V AVGYG+E G D+W+VKNSW +SWG+AGYI+M RN        CGIA  ASY
Sbjct:  139 SLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC-RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRN----RNNNCGIATVASY 320          
The following BLAST results are available for this feature:
BLAST of CX290466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
MDO1_PSEMR1.560e-4348.04Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
MEX1_JACME2.660e-4349.43Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CYSP3_HOMAM2.660e-4351.34Digestive cysteine proteinase 3 OS=Homarus america... [more]
PAPA3_CARPA7.741e-4348.90Caricain OS=Carica papaya PE=1 SV=2[more]
CYSP3_DICDI7.741e-4348.66Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATS_BOVIN1.011e-4249.20Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_CHICK1.320e-4250.27Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CPR2_ARATH2.252e-4250.00Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP5_DICDI6.553e-4248.45Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP2_HOMAM8.558e-4248.66Digestive cysteine proteinase 2 OS=Homarus america... [more]

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Properties
Property NameValue
Genbank descriptionC02024E04SK IF1 Citrus clementina cDNA clone C02024E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290466 ID=CX290466; Name=CX290466; organism=Citrus clementina; type=EST; length=675bp
GAGGGCTGTACAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCAC
TATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGT
AATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGG
TATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTG
ACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGAT
GTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACC
CGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAAT
CGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACT
GCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAA
TTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTA
ACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCA
TATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCC
ATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTG
AGAGCAACACTTGCTGCTGTGTCTT
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