CX290466

Overview
NameCX290466
Unique NameCX290466
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37
Identity = 87/193 (45.08%), Postives = 119/193 (61.66%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDE-------KALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T++DYPY+A +G C   +   KV TID YE + ++DE       +A   A+  QP+SV+I+     F LY  GI+ G   TS   ++H V  VGYG+ +G DYWI KNSWG  WGE GYI ++RN  G L G CG+   ASY
Sbjct:  167 AIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDKV-TIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKD--FHLYTGGIYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRN-TGNLLGVCGMNYFASY 354          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37
Identity = 86/180 (47.78%), Postives = 114/180 (63.33%), Query Frame = 2
Query:   32 TGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY+ ++G C    +N  V  +D   ++ L  E  L+ AV   +PVSVA E     F+LY+SG++T   CGT+   ++H V AVGYG E+G  YW++KNSWG+ WG+ GY +ME          CG+A  ASY
Sbjct:  184 TGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSV-NITLGAEDELKDAVGLVRPVSVAFEVI-TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMG-----KNMCGVATCASY 356          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.860e-37
Identity = 84/186 (45.16%), Postives = 112/186 (60.22%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC  S N GC GG M  AF+++  NGGID+E+ YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   PVSV+I+    +FQ Y  G++    C   +++H V  VGYGT+ G  YWI+KNSWG SWG  GY+ + RN        CGI   AS+
Sbjct:  147 ALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARN----KNNACGITNLASF 326          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.412e-36
Identity = 82/186 (44.09%), Postives = 112/186 (60.22%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC T  N GC GG M  AF+++  NGGID+E+ YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   P+SV+I+    +FQ Y  G++    C   +++H V  VGYGT+ G+ +WI+KNSWG SWG  GY  + RN        CGI   AS+
Sbjct:  147 ALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARN----KNNACGITNMASF 326          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.412e-36
Identity = 84/186 (45.16%), Postives = 112/186 (60.22%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D SC  Y    K      Y ++P  +EKAL++AVA   P+SVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  148 ALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.150e-36
Identity = 84/186 (45.16%), Postives = 112/186 (60.22%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  148 ALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.150e-36
Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 2
Query:    8 VQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            V+ I KI  G L  LSEQ+++DC   Y  GC GG    AFEFII N G+ +   YPYKA  G+C T    N+  +T   Y  VP N+E ++  AV+ QP++VA++     FQ Y+SG+F G CGTSL+H VTA+GY    G D  I    WG+ WGEAGYIRM R+V+ + +G CGIA++  Y
Sbjct:   35 VESIYKIKKGILEPLSEQQVLDCAKGY--GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYIT--GYARVPRNNESSMMYAVSKQPITVAVDANAN-FQYYKSGVFNGPCGTSLNHAVTAIGY----GQDSIIYPKKWGAKWGEAGYIRMARDVSSS-SGICGIAIDPLY 207          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.373e-36
Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  147 ALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.373e-36
Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  147 ALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX290466 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.373e-36
Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 2
Query:    5 AVQGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 553
            A++G  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  147 ALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
The following BLAST results are available for this feature:
BLAST of CX290466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
P34_SOYBN1.670e-3745.08P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP2_MAIZE1.670e-3747.78Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATK_RAT4.860e-3745.16Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MOUSE2.412e-3644.09Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_CANFA2.412e-3645.16Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_PIG3.150e-3645.16Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
BROM2_ANACO3.150e-3646.99Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATK_MACMU5.373e-3645.16Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA5.373e-3645.16Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN5.373e-3645.16Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02024E04SK IF1 Citrus clementina cDNA clone C02024E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290466 ID=CX290466; Name=CX290466; organism=Citrus clementina; type=EST; length=675bp
GAGGGCTGTACAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCAC
TATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGT
AATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGG
TATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTG
ACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGAT
GTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACC
CGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAAT
CGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACT
GCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAA
TTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTA
ACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCA
TATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCC
ATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTG
AGAGCAACACTTGCTGCTGTGTCTT
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