CX290475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21 Identity = 62/153 (40.52%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 223 KEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNK------QRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 657 ++ DEE +E L RE + G E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S+R LI KR + + I L DN+I+E+ LG G+IC+ED+IHEI T+G +F + Sbjct: 112 QDVDEEDEEDDGLIREKIVYDG-----EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSK 259
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21 Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 313 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHF 651 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S+R LI KRG + I L DN+I+E+ LG HGIIC+ED+IHEI T+G F Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESF 261
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20 Identity = 53/130 (40.77%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 298 NPEAKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRG---YGKLNKQ---RIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRRQN 663 N E +LLF++R++G A + K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS+R LI KR Y + +++ I L DN+I+E+ LG G+IC++D+IHEI T+G +F + N Sbjct: 131 NGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCN 260
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19 Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 1 Query: 307 AKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRRQN 663 A LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S+R L+ KR G+ + L DN ++E+ LG G+IC+ED+IHEI T+G F + N Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCN 236
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 51/162 (31.48%), Postives = 95/162 (58.64%), Query Frame = 1 Query: 208 TKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRRQNTSYGPSAQAP 693 T++ +Y E+++E+ L++++ +K GFYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +R+L+Y +G G+ R+ LT+ I + G+ I C+E+L+H I F++ N+ P +P Sbjct: 48 TEKLLNKYYEQEREI--LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSP 205
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 307 AKLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGY-----GKLNKQRIA-LTDNSIIEQALGQH-GIICMEDLIHEILTVGPHFR 654 AKLLFIIRI +G+ V K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+R+L KR + + RI L +N ++E G G IC+EDLIHE+ T+G HF+ Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFK 217
BLAST of CX290475 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 313 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKL------NKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFR 654 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++VR+L+ KR + +++ L DN+++E+ LG GIIC+ED+IHE + F+ Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFK 153 The following BLAST results are available for this feature:
BLAST of CX290475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290475 ID=CX290475; Name=CX290475; organism=Citrus clementina; type=EST; length=693bpback to top |