CX290481

Overview
NameCX290481
Unique NameCX290481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.152e-12
Identity = 45/131 (34.35%), Postives = 66/131 (50.38%), Query Frame = 2
Query:   14 MAPISVGDPLSEGPLAYF--DKINQLLTVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTF--PDNKTMTFLADGSAKYTPALGFDLDLTEKRLDTRS 394
            MAPI  GD        Y+   +  +     +     +KK ++  VPGAFTP CT  ++ G+I+ +  + SKGV  +L IT NDPF +          D K + F++D + K T  LG  +DL+   L TRS
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGAFELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRS 131          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.566e-12
Identity = 31/105 (29.52%), Postives = 55/105 (52.38%), Query Frame = 2
Query:   89 TVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTFPDNKTMTFLADGSAKYTPALGFDLDLTEKRLDTRSRNF 403
            T  +  I   KKV++FG+PGA+T  C+  +V  +   +D+L +KGV  ++C++ NDP+ +N           + F  D    +  +L  ++DL+   L  RS  +
Sbjct:   61 TTPLKDIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRW 165          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PMPA_CANBO (Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.566e-12
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 2
Query:   14 MAPISVGDPLSEGPLAYF--DKINQLLTVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTF--PDNKTMTFLADGSAKYTPALGFDLDLTEKRLDTRS 394
            MAPI  GD        Y+   +  +   + +     +KK ++  VPGAFTP CT  ++ G+I+ +  + SKGV  +L I+ NDPF +          D K + F++D + K T  LG  +DL+   L TRS
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGPLELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWKKELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRS 131          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.377e-12
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 2
Query:   14 MAPISVGDPLSEGPLAYFDKINQLLTVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTFPDNKTMTFLADGSAKY 337
            MAPI VGD +    +   +  N+   V++  +   KK +LFG+PGAFTP C+  ++ GF+E+ D L +KG+  + C+T ND F              +  LAD S  +
Sbjct:   58 MAPIKVGDAIPSVEVFEKEPGNK---VNLAELFKGKKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTF 162          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.663e-11
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 2
Query:  119 KKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTFPDNKTMTFLADGSAKYTPALGFDLDLTEKRLDTRSRNF 403
            KKV++  +PGA+TP C   ++   +++VDEL +KGV  +  I  NDPF M A  N       + F  D    ++ ALG  +DL+ K    R+  +
Sbjct:   49 KKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAKHFGERTARY 143          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 2.172e-11
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 2
Query:   14 MAPISVGDPLSEGPLAYFDKINQLLTVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTFPDNKTMTFLADGSAKYTPALGFDLDL 367
            MAPI VGD +    +   +  N+   V++  +   KK +LFGVPGAFTP C+  ++ GF+E+ + L +KGV  + C++ ND F              +  LAD     T A G + DL
Sbjct:   53 MAPIKVGDAIPAVEVFEGEPGNK---VNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADP----TGAFGKETDL 163          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PMP20_EMENI (Putative peroxiredoxin pmp20 OS=Emericella nidulans GN=AN8692 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.172e-11
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  113 ASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTN-TFPDNKTMTFLADGSAKYTPALGF 355
            A KKVILF +PGAFTP C+  +V  +IE++ E+ +KGV  +  + +ND F M+A        N  + FL+D  AK++ ++G+
Sbjct:   44 ADKKVILFALPGAFTPVCSARHVPEYIERLPEIRAKGVDVVAVLAYNDAFVMSAWGKANGVKNDDILFLSDPEAKFSKSIGW 125          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.837e-11
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 2
Query:   14 MAPISVGDPLSEGPLAYFDKINQLLTVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTFPDNKTMTFLADGSAKYTPALGFDLDL 367
            MAPI VGD +    +   +  N+   V++  +   KK +LFGVPGAFTP C+  ++ GF+E+ + L +KGV  + C++ ND F              +  LAD     T A G + DL
Sbjct:   54 MAPIKVGDAIPAVEVFEGEPGNK---VNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADP----TGAFGKETDL 164          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.705e-11
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 2
Query:   14 MAPISVGDPLSEGPLAYFDKINQLLTVSVHSIAASKKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTFPDNKTMTFLADGSAKYTPALGFDLDL 367
            MAPI VGD +    +   +  N+   V++  +   KK +LFGVPGAFTP C+  ++ GF+E+ + L +KGV  + C++ ND F              +  LAD     T A G + DL
Sbjct:   54 MAPIKVGDAIPAVEVFEGEPGNK---VNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADP----TGAFGKETDL 164          
BLAST of CX290481 vs. ExPASy Swiss-Prot
Match: PMP20_LIPKO (Putative peroxisomal peroxiredoxin OS=Lipomyces kononenkoae PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 2
Query:  119 KKVILFGVPGAFTPTCTLNYVTGFIEKVDELNSKGVHEILCITFNDPFEMNACTNTF-PDNKTMTFLADGSAKYTPALGFDLDL 367
            K V++  +PGAFTPTCT N++  F+EK   L S GV  ++ ++ NDPF  +A        ++   F +D  A+++ + G  LDL
Sbjct:   41 KTVVIVAIPGAFTPTCTANHIPPFVEKFTALKSAGVDAVIVLSANDPFVQSAFGKALGVTDEAFIFASDPGAEFSKSAGLSLDL 124          
The following BLAST results are available for this feature:
BLAST of CX290481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PMPB_CANBO1.152e-1234.35Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
PRX2F_ORYSJ2.566e-1229.52Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]
PMPA_CANBO2.566e-1233.59Putative peroxiredoxin-A OS=Candida boidinii GN=PM... [more]
PRDX5_BOVIN4.377e-1234.26Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]
MALF2_MALFU1.663e-1134.74Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]
PRDX5_HUMAN2.172e-1134.75Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PMP20_EMENI2.172e-1140.24Putative peroxiredoxin pmp20 OS=Emericella nidulan... [more]
PRDX5_CERAE2.837e-1134.75Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]
PRDX5_PAPHA3.705e-1134.75Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PMP20_LIPKO6.320e-1136.90Putative peroxisomal peroxiredoxin OS=Lipomyces ko... [more]

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Properties
Property NameValue
Genbank descriptionC02024F08SK IF1 Citrus clementina cDNA clone C02024F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290481 ID=CX290481; Name=CX290481; organism=Citrus clementina; type=EST; length=433bp
ATTCTATCTCTAAATGGCTCCTATCTCAGTCGGTGACCCCTTGTCGGAGG
GCCCTCTCGCTTACTTCGACAAAATAAATCAATTGCTGACTGTGTCCGTA
CACTCGATCGCTGCCAGTAAAAAGGTCATCCTCTTTGGCGTCCCCGGTGC
TTTCACTCCTACTTGCACTTTGAATTATGTGACTGGATTCATCGAGAAAG
TTGATGAGCTGAATTCCAAAGGCGTCCATGAAATTCTCTGCATAACCTTC
AATGACCCTTTTGAGATGAACGCATGTACCAACACATTTCCTGACAACAA
GACCATGACTTTCCTGGCTGATGGCTCTGCCAAATACACCCCTGCTTTGG
GGTTTGACCTTGACCTCACCGAGAAAAGACTTGACACCCGGTCCAGGAAT
TTTGCTCTCTTGCTTAATAACCTCAAGGCGAAA
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