CX290484

Overview
NameCX290484
Unique NameCX290484
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length502
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_XYLFA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa GN=metE PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.877e-59
Identity = 113/167 (67.66%), Postives = 134/167 (80.24%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +PMKGMLTGPVT+L WSFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V+DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIH
Sbjct:  534 PAPMTVTWSAYAQSLTDKPMKGMLTGPVTMLQWSFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVRDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIH 699
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.451e-59
Identity = 113/167 (67.66%), Postives = 133/167 (79.64%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +PMKGMLTGPVT+L WSFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIH
Sbjct:  534 PAPMTVTWSAYAQSLTDKPMKGMLTGPVTMLQWSFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVHDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIH 699
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.451e-59
Identity = 113/167 (67.66%), Postives = 133/167 (79.64%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +PMKGMLTGPVT+L WSFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIH
Sbjct:  534 PAPMTVTWSAYAQSLTDKPMKGMLTGPVTMLQWSFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVHDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIH 699
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.451e-59
Identity = 113/167 (67.66%), Postives = 133/167 (79.64%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +PMKGMLTGPVT+L WSFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIH
Sbjct:  534 PAPMTVTWSAYAQSLTDKPMKGMLTGPVTMLQWSFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVHDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIH 699
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_NITWN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=metE PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.451e-59
Identity = 116/167 (69.46%), Postives = 129/167 (77.25%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P+ MTV W   AQS+TA+PMKGMLTGPVTILNWSFVR+D PR   C QIALAI+DEV DLE+AG  +IQIDEAALREGLPLR+SE   YLDWAV  FR+   GV D TQIHTHMCYS FNDII +I  MDADVI+IE SRS  +LL  F+   KY   IGPGVYDIH
Sbjct:  549 PRPMTVGWWKYAQSLTAKPMKGMLTGPVTILNWSFVRDDVPRSLACRQIALAIRDEVSDLEQAGATMIQIDEAALREGLPLRRSEWKTYLDWAVECFRLCASGVADATQIHTHMCYSEFNDIIDAIASMDADVISIETSRSKMELLDAFKT-YKYPNEIGPGVYDIH 714
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.132e-59
Identity = 113/167 (67.66%), Postives = 130/167 (77.84%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIH
Sbjct:  540 PAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIH 705
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_BORPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella parapertussis GN=metE PE=3 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 7.132e-59
Identity = 113/167 (67.66%), Postives = 130/167 (77.84%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIH
Sbjct:  540 PAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIH 705
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_BORBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella bronchiseptica GN=metE PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.132e-59
Identity = 113/167 (67.66%), Postives = 130/167 (77.84%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIH
Sbjct:  540 PAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIH 705
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.075e-58
Identity = 109/167 (65.27%), Postives = 132/167 (79.04%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P+ +TV W+  AQS+T++P+KGMLTGP+T+L WSFVR+DQPR  T  QIALA++ EV DLE AGI +IQ+DE ALREGLPLRK +   YLDWAV +F+I+  GV DTTQIHTHMCY+ FNDII +I D+DADVITIE SRS+ +LLS F E   Y   IGPGVYDIH
Sbjct:  539 PRKITVDWAEYAQSLTSKPVKGMLTGPITMLQWSFVRDDQPRKITAQQIALALRSEVNDLEAAGITIIQVDEPALREGLPLRKKDWQNYLDWAVEAFKISTAGVGDTTQIHTHMCYAEFNDIIQAIADLDADVITIETSRSNMELLSAF-EQFNYPNDIGPGVYDIH 704
[Close]
BLAST of CX290484 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.030e-57
Identity = 112/167 (67.07%), Postives = 129/167 (77.25%), Query Frame = 2 
Query:    2 PKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIH 502
            P  MTV WS  AQS+T +PMKGMLTGPVTIL WSFVR+DQPR  TC QIAL+++DEV DLE AGI +IQIDE ALREGLPLR+ E   YLDWAV SF+++    +D TQIHTHMCYS FNDII +I  +DADVITIE SRSD +LL  F++   Y   IGPGVYDIH
Sbjct:  535 PGPMTVRWSEYAQSLTDKPMKGMLTGPVTILQWSFVRDDQPRDATCRQIALSLRDEVADLEAAGIKIIQIDEPALREGLPLRQGEWQEYLDWAVKSFKLSAAVARDETQIHTHMCYSEFNDIIAAIAALDADVITIETSRSDMELLDAFQD-FAYPNEIGPGVYDIH 700
The following BLAST results are available for this feature:
BLAST of CX290484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_XYLFA1.877e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT2.451e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM2.451e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF22.451e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITWN2.451e-5969.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPE7.132e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPA7.132e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORBR7.132e-5967.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD22.075e-5865.275-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD1.030e-5767.075-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC02024F11SK IF1 Citrus clementina cDNA clone C02024F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290484 ID=CX290484; Name=CX290484; organism=Citrus clementina; type=EST; length=502bp
TCCCAAGGCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTG
CTCGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGG
TCCTTTGTCAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGC
TTTGGCCATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACG
TTATTCAAATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAA
TCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCAC
CAACTGTGGTGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACT
CCAACTTCAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTG
ATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCG
TGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCC
AC
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