CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 123/222 (55.41%), Postives = 164/222 (73.87%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N  E +K+LASLA+++VNDAFG+AHRAH ST GV ++LKP+V G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++    ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE
Sbjct:  124 RKEETKNGEELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAE 344          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACC4 (Phosphoglycerate kinase OS=Bacillus cereus (strain B4264) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 9.481e-65
Identity = 114/218 (52.29%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_FERNB (Phosphoglycerate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64
Identity = 120/224 (53.57%), Postives = 162/224 (72.32%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPA-TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            P  ++ND E AKK ASLAD++VNDAFG+AHRAH+S  G+A+++ PSVAGFLM+KE+ +L  A  NP KP+  ++GG+KVS KIGVI +LL K D +++GG M+FTF++A G   G+SLVEEDK+DL   L+E+AK KGV L++PTD V A K  A    KV      IP+GW G D+GP +I+     L   KTI+WNGP+GVFE + FA GT+A+A+ +A L+
Sbjct:  121 PGEEKNDLELAKKWASLADIHVNDAFGTAHRAHSSNVGIAQYI-PSVAGFLMEKEIKFLSKATHNPDKPYVVVLGGAKVSDKIGVITNLLNKADKIIIGGAMMFTFWRALGKQTGNSLVEEDKIDLAKQLLEQAKEKGVELVIPTDAVCAQKMEAGVEKKVFTCEEGIPEGWAGYDIGPASIELIKSKLADAKTIVWNGPLGVFEIEDFANGTKAVAEFIASLT 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.617e-64
Identity = 114/218 (52.29%), Postives = 162/218 (74.31%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOBM (Phosphoglycerate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pgk PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.112e-64
Identity = 117/222 (52.70%), Postives = 162/222 (72.97%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF K+ G++VG SL+EEDK++    ++ KAK KGV+ LLP D+ IAD+F  DA   V     + +G+MGLD+G    K +++A+ + KT+IWNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEIFSKELASLADVFVNDAFGTAHRAHCSTVGVTHYLKEAACGYLIQKELKFLGNAVETPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKSLGYTVGDSLLEEDKVEYAKEMINKAKEKGVNFLLPVDITIADRFDKDAEPIVTEDQNVKEGYMGLDIGSKTAKIYADAIKSAKTVIWNGPMGVFEFKNFANGTIEVAKAMAD 345          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 113/218 (51.83%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACCN (Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 114/218 (52.29%), Postives = 161/218 (73.85%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M  AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSNGTRAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 113/218 (51.83%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 113/218 (51.83%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +++V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTQIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 113/218 (51.83%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOP11.910e-6555.41Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_BACC49.481e-6552.29Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_FERNB1.238e-6453.57Phosphoglycerate kinase OS=Fervidobacterium nodosu... [more]
PGK_BACC11.617e-6452.29Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_CLOBM2.112e-6452.70Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_BACCZ2.759e-6451.83Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACCN2.759e-6452.29Phosphoglycerate kinase OS=Bacillus cereus subsp. ... [more]
PGK_BACC32.759e-6451.83Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC22.759e-6451.83Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC02.759e-6451.83Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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