CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 113/218 (51.83%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACCQ (Phosphoglycerate kinase OS=Bacillus cereus (strain Q1) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.603e-64
Identity = 113/218 (51.83%), Postives = 162/218 (74.31%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSQGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACC7 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH187) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.603e-64
Identity = 113/218 (51.83%), Postives = 162/218 (74.31%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSQGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_DEIGD (Phosphoglycerate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 121/222 (54.50%), Postives = 162/222 (72.97%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAEL 673
            P  ++NDPE  ++LA L D +V DAFGSAHRAHAS  GVA  L P  AG L+  E++ L   + +P +P+  I+GG+KVS KI VIE+LL +VD +L+GGGM+FTF +A+G  +G+SLVEED++     L+E+    G  L+LPTD V AD+FA DA ++VVPA  IPDGWMGLD+GP+  ++++EAL   KT+ WNGPMGVFEF  FAAGT A+A+ +AEL
Sbjct:  120 PGEEKNDPELVEQLARLGDAFVLDAFGSAHRAHASVSGVAGRL-PHAAGLLLHNEVEALSRLLHDPARPYVVIIGGAKVSDKIKVIENLLPRVDRMLIGGGMMFTFIRARGGQIGNSLVEEDQVAYARQLLEQY---GDRLMLPTDAVAADRFAPDAQTRVVPADRIPDGWMGLDIGPETARAYAEALQGAKTVFWNGPMGVFEFPAFAAGTNAVAQAVAEL 337          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 112/218 (51.38%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSQGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 112/218 (51.38%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIG+I  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACAC (Phosphoglycerate kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 112/218 (51.38%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIG+I  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACAA (Phosphoglycerate kinase OS=Bacillus anthracis (strain A0248) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 112/218 (51.38%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KEL+ L  A+SNP++PF AI+GG+KV  KIG+I  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++L    M+ AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.027e-64
Identity = 113/218 (51.83%), Postives = 162/218 (74.31%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            ++ND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G LM+KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E DK++L    M+ AK KGV+  +P DVVI ++F+  A +++V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+
Sbjct:  124 EKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCENDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTQIVGIDSIPSTWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_SULDN (Phosphoglycerate kinase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.048e-63
Identity = 118/219 (53.88%), Postives = 157/219 (71.69%), Query Frame = 2
Query:   20 RNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFL--KPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            +ND E +KKLAS+AD Y+NDAFG +HRAHAS EG+  F   K   AGFL+QKE+D+L   + NP +PFAAIVGGSKVS K+  + +LL +VD +L+GGGM FTF K  G+ +G+SLVE+D L+    +M++AK  GV   LP DVV+ADKF+ DA SK+V    IP  WMGLD+GP  ++ + E L   +T++WNGPMGV+E DKFA G+  IA  +A+
Sbjct:  126 KNDKELSKKLASMADFYINDAFGVSHRAHASVEGITHFFDDKHKAAGFLLQKEIDFLGKIIQNPVRPFAAIVGGSKVSGKLEALINLLPRVDKVLIGGGMAFTFLKKLGYDIGASLVEDDLLEEAGRIMDEAKKLGVKFYLPVDVVVADKFSEDAISKIVSYQEIPPLWMGLDIGPATVRLYGEVLSDVQTVLWNGPMGVYEMDKFARGSNKIAHFVAD 344          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACAH2.759e-6451.83Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACCQ3.603e-6451.83Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC73.603e-6451.83Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_DEIGD6.146e-6454.50Phosphoglycerate kinase OS=Deinococcus geothermali... [more]
PGK_BACHK6.146e-6451.38Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACAN6.146e-6451.38Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]
PGK_BACAC6.146e-6451.38Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACAA6.146e-6451.38Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACWK8.027e-6451.83Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]
PGK_SULDN1.048e-6353.88Phosphoglycerate kinase OS=Sulfurimonas denitrific... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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