CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.503e-86
Identity = 151/220 (68.64%), Postives = 190/220 (86.36%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++NDP+FAK+L+ LA++YVNDAFG+AHRAHASTEGV KFL P+VAG+LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+ESL++K D +L+GGGMIFTFYKA+G SVG SLVE+DKL+L  +L EKAKSKGV LLLPTDVV+AD F+ DANS++    +IP+GWMGLD+GPD++K F +AL+  +T+IWNGPMGVFEFDKFA GT +IA  L+ LS
Sbjct:  128 EKNDPDFAKELSELAEVYVNDAFGAAHRAHASTEGVTKFLSPNVAGYLMEKELQYLQGAIDSPKRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLELAKALEEKAKSKGVELLLPTDVVLADNFSPDANSQIAQINSIPEGWMGLDIGPDSVKLFQDALEDCQTVIWNGPMGVFEFDKFANGTNSIATTLSVLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 1.963e-86
Identity = 157/220 (71.36%), Postives = 185/220 (84.09%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND  FA+KLA+LAD YVNDAFG+AHRAHASTEGV KFL PSVAG LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD F+ DANS+ V   AIPDGWMGLD+GPD+I  F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LS
Sbjct:  128 EKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFSPDANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.374e-86
Identity = 156/220 (70.91%), Postives = 184/220 (83.64%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++N+  FA+KLA LA++YVNDAFG+AHRAHASTEGV KFLKPSVAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+++L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+ GV LLLPTDVV+AD FA DANS+     AIPDGWMGLD+GPD+IK F EAL   +T+IWNGPMGVFEFDKFA GT +IA  LA+LS
Sbjct:  128 EKNEAGFAEKLAGLAEVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLDTLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKANGVQLLLPTDVVLADNFAPDANSQTADINAIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVFEFDKFATGTNSIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.374e-86
Identity = 154/218 (70.64%), Postives = 185/218 (84.86%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            NDPEFA++LAS+ADLYVNDAFG+AHRAHASTEGV   L PSVAG+L++KEL YL  A+  P++P AAIVGGSKVS+KIGVIE+LL+KVD LL+GGGMIFTFYKA+G +VG SLVEEDKLDL  +L  KAK KGV+LLLP+DVV+AD FAADAN++ V    IPDGWMGLD+GP+++K F  AL   KT+IWNGPMGVFEFDKFAAGT+A+A  LA ++
Sbjct:  130 NDPEFARQLASVADLYVNDAFGTAHRAHASTEGVTHHLSPSVAGYLIEKELKYLQAAIEGPQRPLAAIVGGSKVSSKIGVIETLLDKVDKLLIGGGMIFTFYKARGLAVGKSLVEEDKLDLARTLEAKAKEKGVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGLDIGPNSVKEFQAALSDCKTVIWNGPMGVFEFDKFAAGTDAVAHSLAAIT 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 5.712e-86
Identity = 154/218 (70.64%), Postives = 184/218 (84.40%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            NDP+FAKKLA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+  P++P AAI+GGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KAK KGV  LLPTDVV+ADKF  DA S++V    IPDGWMGLD+GP+++K F EAL   K+++WNGPMGVFEFDKFAAGT+AIA  LA+L+
Sbjct:  131 NDPDFAKKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQAAIETPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKEKGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGLDIGPESVKVFQEALSNCKSVLWNGPMGVFEFDKFAAGTDAIAHTLADLT 348          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 7.461e-86
Identity = 156/218 (71.56%), Postives = 181/218 (83.03%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ND EFAK LA+ ADLYVNDAFG+AHRAHASTEGV  FL P+VAG+L++KEL +L GA+  PK+P  AIVGGSKVS+KIGVIE+LL+K D L++GGGMIFTFYKAQG + G SLVEEDKLDL  SLM KAK KGV  LLPTDVV+AD FA DAN++ V   AIPDGWMGLD+GPD++K+F +AL    T+IWNGPMGVFEFDKFA GTEAIA  LAEL+
Sbjct:  130 NDAEFAKALAANADLYVNDAFGTAHRAHASTEGVTHFLSPNVAGYLIEKELQFLQGAIEAPKRPLVAIVGGSKVSSKIGVIETLLDKCDKLIIGGGMIFTFYKAQGLNTGKSLVEEDKLDLAKSLMAKAKEKGVEFLLPTDVVVADNFAPDANAQTVGVDAIPDGWMGLDIGPDSVKTFQDALAGCGTVIWNGPMGVFEFDKFAVGTEAIACSLAELT 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 7.461e-86
Identity = 155/218 (71.10%), Postives = 182/218 (83.49%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ND EFAK LASLAD+YVNDAFG+AHRAHA T GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDL  SLM KA+ KGV LLLP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+++K F  AL   +++IWNGPMGVFEFD+FA GTEAIA+ LA L+
Sbjct:  130 NDAEFAKALASLADIYVNDAFGAAHRAHAPTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEGALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLT 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 7.461e-86
Identity = 157/220 (71.36%), Postives = 184/220 (83.64%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND  FA+KLA+LAD YVNDAFG+AHRAHASTEGV KFL PSVAG LM+KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA  ANS+ V   AIPDGWMGLD+GPD+I  F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LS
Sbjct:  128 EKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_TRIEI (Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.171e-85
Identity = 153/216 (70.83%), Postives = 186/216 (86.11%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            NDPEFAK+LAS+ADLYVNDAFG+AHRAHASTEGV K+L PSVAG+L+++EL +L GA+ +P+KP AAI+GGSKVS+KIGVIE+LL+K D LLLGGGMIFTFYKA+G SVG SLVEEDK++L  SL  KAK KGV++LLPTDVV+ADKF  +AN++ V   AIPDGWMGLD+GP++ K F +AL   KT+IWNGPMGVFE +KFA GTEAIA+ LA+
Sbjct:  129 NDPEFAKQLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGYLIEQELKFLQGAIDSPQKPLAAIIGGSKVSSKIGVIEALLDKCDKLLLGGGMIFTFYKARGLSVGKSLVEEDKIELAKSLEAKAKEKGVTMLLPTDVVVADKFDPEANTQTVSIEAIPDGWMGLDIGPESAKVFQDALADCKTVIWNGPMGVFEMEKFAKGTEAIAQTLAD 344          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.171e-85
Identity = 151/223 (67.71%), Postives = 186/223 (83.41%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            P  + NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L+++EL +L GA+ +P++P AAI+GGSKVSTKIGVIE LLEKVD LLLGGGMIFTFY+AQG   G SLVE DKLDL  SLMEKAK +GV LLLP DVV+AD+F  DA ++ V   AIP+ WMGLD+GP+++K+F  AL   +T++WNGPMGVFEFD+FA GTEAIA+ LA+L+
Sbjct:  136 PEEEDNDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVERELQFLSGAIEDPRRPLAAIIGGSKVSTKIGVIERLLEKVDKLLLGGGMIFTFYQAQGIQTGKSLVETDKLDLARSLMEKAKERGVELLLPVDVVVADRFDKDAQAQTVSIHAIPEDWMGLDIGPESVKAFQSALQGCQTVVWNGPMGVFEFDRFALGTEAIARTLADLT 358          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROM41.503e-8668.64Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM31.963e-8671.36Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNSC4.374e-8670.91Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ACAM14.374e-8670.64Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_MICAN5.712e-8670.64Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_SYNY37.461e-8671.56Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_SYNP67.461e-8671.10Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMM7.461e-8671.36Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_TRIEI2.171e-8570.83Phosphoglycerate kinase OS=Trichodesmium erythraeu... [more]
PGK_SYNJB2.171e-8567.71Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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