CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14268 contig Ccv1_Contig14268:467..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.407e-84
Identity = 154/218 (70.64%), Postives = 181/218 (83.03%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            NDPEF+K+LA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KA  KGV LLLPTDVV+AD F A+AN K V    IPDGWMGLD+GPD++K F +AL   K++IWNGPMGVFEFDKFA GTEAIA  L  L+
Sbjct:  130 NDPEFSKQLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKASEKGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGLDIGPDSVKLFQDALADCKSVIWNGPMGVFEFDKFAKGTEAIAYTLETLT 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.400e-84
Identity = 152/218 (69.72%), Postives = 182/218 (83.49%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            NDPEFA+KLA+ ADLYVNDAFG+AHRAHASTEGV  +L P+VAG+L++KEL+YL  A+ NP++P  AI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVE+DKL+L  SL  KAK KGV  LLPTDVV+AD FA DAN+K V   AI DGWMGLD+GP+++K F  AL   K++IWNGPMGVFEFDKFA GTEAIA  LAEL+
Sbjct:  129 NDPEFAQKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPNVAGYLIEKELNYLQAAIENPQRPLVAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEDDKLELAKSLEAKAKEKGVDFLLPTDVVLADNFAPDANAKTVSIDAIEDGWMGLDIGPESVKVFQAALADCKSVIWNGPMGVFEFDKFAKGTEAIAHTLAELT 346          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.094e-84
Identity = 150/220 (68.18%), Postives = 188/220 (85.45%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFAKKLASLA++YVNDAFG+AHRAHASTEGV  +L PSVAG+LM+KEL YL GA+ +P++P AAIVGGSKVS+KIGV+ESL++K D +L+GGGMIFTFYKA+G SVG SLVE+DKLDL  +L +KAK KGV LLLP+DVV+AD F+ DA+S++V   +IP+GWMGLD+G +++K F +AL   KT+IWNGPMGVFEFDKFA GT +I+  LAELS
Sbjct:  128 EKNDSEFAKKLASLAEVYVNDAFGAAHRAHASTEGVTNYLSPSVAGYLMEKELKYLQGAIDSPQRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLDLARALEKKAKEKGVQLLLPSDVVLADNFSPDASSQMVQIDSIPEGWMGLDIGKESVKLFQDALADCKTVIWNGPMGVFEFDKFANGTNSISTTLAELS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 9.120e-84
Identity = 151/220 (68.64%), Postives = 184/220 (83.64%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFAK+LASLA++YVNDAFG+AHRAHASTEGV KFL P VAG+LM+KEL YL GA+  PK P AAIVGGSKVS+KIGV+ESL++K D +++GGGMIFTFYKA+G SVG+SLVEEDKL+L ++L +KAK KGV  LLPTDVV+AD F+ DANSK+    AI +GWMGLD+G ++++ F  AL   KT+IWNGPMGVFEF+KFA GT AIA  LAELS
Sbjct:  128 EKNDTEFAKELASLAEVYVNDAFGAAHRAHASTEGVTKFLSPCVAGYLMEKELKYLQGAIDQPKSPLAAIVGGSKVSSKIGVLESLIDKCDKIIVGGGMIFTFYKARGLSVGNSLVEEDKLELASALEKKAKEKGVEFLLPTDVVLADNFSPDANSKLSKVDAISEGWMGLDIGSESVELFQNALKDCKTVIWNGPMGVFEFEKFANGTNAIANTLAELS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.191e-83
Identity = 153/220 (69.55%), Postives = 182/220 (82.73%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFAKKLAS AD+YVNDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GA+ +PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    +I   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS
Sbjct:  128 EKNDLEFAKKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAIDSPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.653e-83
Identity = 154/220 (70.00%), Postives = 179/220 (81.36%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            P  ++NDPEFAK+LA+ AD+YVNDAFG+AHRAH STEGV   +  SVAG L++KEL +L GA+  PK+P  AIVGGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKAQG SVG SLVE+DK+DL  SLMEKA+ K   +LLPTDV++ADKFA DA +K V   AIPDGWMGLD+G D++K F EALD   T IWNGPMGVFEFDKFA GTEAIAK LA
Sbjct:  125 PGEEKNDPEFAKQLAANADIYVNDAFGTAHRAHGSTEGVTHHVDTSVAGLLIEKELQFLKGAIEAPKRPLVAIVGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKAQGKSVGGSLVEDDKIDLAKSLMEKAQGK---ILLPTDVIVADKFAPDAEAKTVSVDAIPDGWMGLDIGADSVKVFQEALDGCGTAIWNGPMGVFEFDKFAVGTEAIAKTLA 341          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM2 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=pgk PE=3 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.466e-83
Identity = 152/220 (69.09%), Postives = 181/220 (82.27%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFAKKLAS AD+Y+NDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GA+ +PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    +I   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS
Sbjct:  128 EKNDLEFAKKLASHADMYINDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAIDSPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLKLAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISRIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROMS (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pgk PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.526e-83
Identity = 153/220 (69.55%), Postives = 181/220 (82.27%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFA+KLAS AD+YVNDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GAV +P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    AI   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS
Sbjct:  128 EKNDLEFAEKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDAISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.720e-83
Identity = 149/220 (67.73%), Postives = 184/220 (83.64%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFAK+LASLA++YVNDAFG+AHRAHASTEGV KFL P VAG+LM+KEL YL GA+  P+ P AAIVGGSKVS+KIGV+ESL++K D +++GGGMIFTFYKA+G SVG+SLVEEDKL+L ++L +KA+ KGV  LLPTDVV+AD F+ DANSK+    AI +GWMGLD+G ++++ F  AL   KT+IWNGPMGVFEF+KFA GT AIA  LAELS
Sbjct:  128 EKNDTEFAKELASLAEVYVNDAFGAAHRAHASTEGVTKFLSPCVAGYLMEKELKYLQGAIDQPQSPLAAIVGGSKVSSKIGVLESLIDKCDKIIVGGGMIFTFYKARGLSVGNSLVEEDKLELASALEKKAQEKGVEFLLPTDVVLADNFSPDANSKLSKVDAISEGWMGLDIGSESVELFQNALKDCKTVIWNGPMGVFEFEKFANGTNAIANTLAELS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.902e-81
Identity = 150/220 (68.18%), Postives = 180/220 (81.82%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND EFA+KLAS AD+YVNDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GAV +P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+A++F+ DA SK+    +I   WMGLD+GPD+IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS
Sbjct:  128 EKNDLEFAQKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLANEFSPDAESKISQIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLS 347          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CYAP71.407e-8470.64Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_CYAP82.400e-8469.72Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_PROMA4.094e-8468.18Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM19.120e-8468.64Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM91.191e-8369.55Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNP22.653e-8370.00Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM23.466e-8369.09Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROMS4.526e-8369.55Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROMT7.720e-8367.73Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM01.902e-8168.18Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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