CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.226e-81
Identity = 149/220 (67.73%), Postives = 181/220 (82.27%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND +FAK LAS AD+YVNDAFG+AHRAHAST+GV KFL+P+VAGFL++KEL YL GA+  PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L  KAK+KGV LLLP+DV++A++F+ DA SKV    AI   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS
Sbjct:  128 EKNDLDFAKNLASHADMYVNDAFGAAHRAHASTQGVTKFLEPAVAGFLLEKELKYLQGAIDAPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEAKAKNKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.363e-79
Identity = 147/220 (66.82%), Postives = 179/220 (81.36%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++ND  FAK LA+ AD+YVNDAFG+AHRAHAST+GV KFL+PSVAGFL++KEL YL GA+  P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L EKAK+KGV LLLP+DVV+A++F+  A SKV    +I   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT +IA  LA+LS
Sbjct:  128 EKNDLNFAKNLAAHADMYVNDAFGAAHRAHASTQGVTKFLEPSVAGFLLEKELKYLQGAIDAPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEEKAKTKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNSIATTLADLS 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.559e-75
Identity = 137/221 (61.99%), Postives = 172/221 (77.83%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE AK  A LADLYVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN+KVVP  AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+AIA+ LAE
Sbjct:  121 PGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAE 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.320e-74
Identity = 132/216 (61.11%), Postives = 171/216 (79.17%), Query Frame = 2
Query:   23 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            NDPEFAK LASL +++VNDAFG+AHRAHASTEGV  ++  SVAG+L+ KEL YL  A +NP +PF AI+GG+K+S KI V+E+LL KVD +L+GG M+FTF+KAQG+++G SLVE+DKL+L  S++EKAK+ GV  LLPTDVV+ADKF  DAN+K+    +I D WMGLD+GP+    F E +   KT+IWNGPMGVFE +KFA GT A+A+ LA+
Sbjct:  126 NDPEFAKSLASLGEVFVNDAFGTAHRAHASTEGVTNYVAESVAGYLIGKELTYLGEATANPVRPFVAILGGAKISGKIDVLENLLGKVDTVLVGGAMVFTFFKAQGYNIGKSLVEDDKLELAKSILEKAKTSGVKFLLPTDVVLADKFDQDANTKIATIDSIEDDWMGLDIGPETANCFREEVVNAKTVIWNGPMGVFEMEKFAKGTMAVAQALAD 341          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.941e-74
Identity = 135/221 (61.09%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE AK  A LADLYVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KEL+ L  A+SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE + FA GT+AIA+ LAE
Sbjct:  121 PGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVAIDAIPSDWEALDIGPKTRELYRDVIRQSKLVVWNGPMGVFEMEAFAHGTKAIAEALAE 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.941e-74
Identity = 131/220 (59.55%), Postives = 174/220 (79.09%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            ++NDPE AK  A+LADL+VNDAFG+AHRAHAST G+A+++ P+VAG LM+KE+ ++ GA+SNP++PF AIVGG+KV  KI VIE+LL KVD L++GGGM  TF KAQG+ +G+SL E+DKLDL  +LME+AK +GV LL+P DVV+AD+FAADA  +VV   AIP+GWM LD+GP  ++ +   +  +KT++WNGPMGVFE D FA GT  +AK +A  S
Sbjct:  124 EKNDPELAKSFAALADLFVNDAFGTAHRAHASTAGIAEYI-PAVAGLLMEKEIRFMGGALSNPERPFTAIVGGAKVKDKIAVIENLLTKVDHLIIGGGMANTFLKAQGYGIGASLCEDDKLDLARTLMEQAKERGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMALDIGPKTVEQYHSVIVDSKTVVWNGPMGVFEMDAFAGGTIGVAKAMAACS 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.941e-74
Identity = 130/221 (58.82%), Postives = 174/221 (78.73%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE +K  A LAD+YVNDAFG+AHRAHAST G+A+ L P+VAGFLM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVIESLLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S M++AK KGV+  +PTDV++AD F+ DAN+K+VP + IP  W  LD+G +  K++++ +  +K ++WNGPMGVFE D FA GT A+A+ LAE
Sbjct:  121 PGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAEHL-PAVAGFLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIESLLEKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPTDVLVADDFSNDANTKIVPVSEIPSDWEALDIGEETRKTYADVIKNSKLVVWNGPMGVFEIDAFAKGTRAVAEALAE 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.117e-73
Identity = 131/221 (59.28%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE AK  A LAD+YVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KE++ L  A+SNP +PF AI+GG+KV  KIGVIE+LL KVD L++GGG+ +TF KA GH +G SL+EEDK++L  S MEKAK KGV+  +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+A+A+ LA+
Sbjct:  121 PGEEKNDPELAKAFAELADIYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIENLLNKVDNLIIGGGLAYTFVKALGHEIGKSLLEEDKIELAKSFMEKAKEKGVNFYMPVDVVVADRFANDANTKVVSIDAIPSDWEALDIGPKTRELYRDVIMKSKLVVWNGPMGVFEMDAFAEGTKAVAQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACSK (Phosphoglycerate kinase OS=Bacillus clausii (strain KSM-K16) GN=pgk PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.459e-73
Identity = 132/223 (59.19%), Postives = 169/223 (75.78%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            P  ++NDPE AK  ASLAD++VNDAFG+AHRAHASTEG+A +L PS AGFLM+KELD L  A+SNP++PF A++GG+KV  KIGVI++LL+KVD L++GGG+ +TF KAQG+ VG SL+EEDKLDL    MEKA+ KGV   +P DV++AD F+ DAN K V  + IP  W  LD+GP   K++   L  +K +IWNGPMGVFE + FA GT+A+A  LAE S
Sbjct:  121 PGEEKNDPELAKAFASLADIFVNDAFGAAHRAHASTEGIAHYL-PSAAGFLMEKELDVLGKALSNPERPFTAVIGGAKVKDKIGVIDNLLDKVDNLIIGGGLAYTFVKAQGYEVGKSLLEEDKLDLAKQFMEKAEQKGVKFYMPEDVIVADDFSDDANKKEVAISGIPADWEALDIGPKTRKTYEAVLKASKLVIWNGPMGVFELESFAGGTKAVANALAEAS 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.235e-72
Identity = 134/220 (60.91%), Postives = 167/220 (75.91%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            PR + ND   A++LA L D+YVNDAFGSAHRAHASTEGVA+FL P+VAGFLM+ EL  L GA+ NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQGH +G SLVE D   +  SL+++A  +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A
Sbjct:  123 PREEANDESMARELAKLGDVYVNDAFGSAHRAHASTEGVARFL-PAVAGFLMEAELAALQGALENPARPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGHEMGDSLVEPDSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMA 341          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMP7.226e-8167.73Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM51.363e-7966.82Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BACST1.559e-7561.99Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_CHLT31.320e-7461.11Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_GEOKA2.941e-7461.09Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]
PGK_BREBN2.941e-7459.55Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_BACLD2.941e-7458.82Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_GEOSW1.117e-7359.28Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_BACSK1.459e-7359.19Phosphoglycerate kinase OS=Bacillus clausii (strai... [more]
PGK_ROSCS1.235e-7260.91Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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