CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_TOLAT (Phosphoglycerate kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48
Identity = 102/218 (46.79%), Postives = 142/218 (65.14%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            K+N  E AKK A+L D++V DAFG+AHRA  ST GVA+F   + AG L+  ELD L  A+  P++P  AIVGGSKVSTK+ V+ESL +  D L++GGG+  TF  A GH+VG SL E D +D    L  +      ++ + TDVV+  +F+    + +   + + D  M  D+GPD+ K+ ++ +   KTI+WNGP+GVFEFD+FA GTE IAK +AE
Sbjct:  119 KKNTEELAKKYAALCDVFVMDAFGTAHRAEGSTYGVAQFAPVACAGPLLAGELDALGKAMLKPERPMVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAAGHNVGKSLCEHDLIDTAKKLAAE-----TNIPVTTDVVVGKEFSESTPATIKSVSEVTDDDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFAKGTEIIAKAIAE 331          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_TETTH (Phosphoglycerate kinase OS=Tetrahymena thermophila GN=PGK PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48
Identity = 98/214 (45.79%), Postives = 140/214 (65.42%), Query Frame = 2
Query:   32 EFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY-KAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            EF K L SL DL+VNDAFG+AHRAH+S  GV   ++   AG+L+++ELDY   A+ +P +PF  ++GG+KV  KI +IES+L+KVD +++GGGM FTF  K     +G+SL +E+   +   L+EKAK+K V + LP D +  D   A+AN++     + IP GW+GLD GP  +   +EA+    TI+WNGP G FE DKF  G+  + K +A
Sbjct:  149 EFRKSLTSLGDLFVNDAFGTAHRAHSSMVGVDHKIR--AAGYLLKRELDYFSKALESPNRPFLVVLGGAKVKDKIQLIESMLDKVDEMIIGGGMAFTFLKKIHNIEIGNSLFDEEGYKIVDQLLEKAKAKNVKIHLPVDFLCGDSLEANANTRSFDLKSGIPAGWIGLDAGPKTMAENAEAVARANTIVWNGPQGRFEVDKFKVGSSDLLKHVA 360          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CORDI (Phosphoglycerate kinase OS=Corynebacterium diphtheriae GN=pgk PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48
Identity = 101/215 (46.98%), Postives = 148/215 (68.84%), Query Frame = 2
Query:   32 EFAKKLASLA---DLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSN-PKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKL 664
            EFA +L +L      +V+D FG  HRA AS   VA+ L P  AG L++KEL+ L   V++ P++P+A I+GG+KVS K+GVIE+L  K D L++GGGM +TF  A+G +V  SL++E++++    L+E    K   ++LP D+V A +FA+DA +K+V    IP+GWM LDVGP  ++ F+E L T+KT+ WNGPMGVFEF+ F+AGT  +A+ +
Sbjct:  137 EFADQLVALTAENGAFVSDGFGVVHRAQASVFDVAQRL-PHYAGTLVEKELEVLGNKVASAPERPYAVILGGAKVSDKLGVIEALATKADKLIIGGGMCYTFLAAKGINVQKSLLQEEQINKCKELLEAYADK---IVLPVDLVAAAEFASDAENKIVAIDEIPEGWMSLDVGPKTVEKFAEVLATSKTVFWNGPMGVFEFENFSAGTRGVAEAI 347          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CHLMU (Phosphoglycerate kinase OS=Chlamydia muridarum GN=pgk PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48
Identity = 104/220 (47.27%), Postives = 146/220 (66.36%), Query Frame = 2
Query:   26 DPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAK-FLKPSVAGFLMQKELDYL-VGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            DP FA +LA+ AD YVNDAFG++HR HAS   V + F   + AGFLM+KEL++L    +  PK+PF AI+GG+KVS+KIGVIE+LL +VD L+L GGM +TF KA    VG+SLVEE  + L   ++EKA+++GV + LP D  +A +     +  ++     IP+G+ G D+G   I  FSE +  + T+ WNGP+GV+E   F  G++AIA+ LA  S
Sbjct:  130 DPSFAVELAAYADFYVNDAFGTSHRKHASVYRVPQMFPDRAAAGFLMEKELEFLGQHLLVEPKRPFTAILGGAKVSSKIGVIEALLSRVDNLVLAGGMGYTFLKAMNQQVGNSLVEETGIPLAKRVLEKARTQGVKIYLPVDAKVARRCETGEDWQELSIQEGIPEGFSGFDIGSKTIALFSEVIQDSATVFWNGPVGVYEVPPFDQGSKAIAQCLASHS 349          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_AZOVD (Phosphoglycerate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48
Identity = 102/217 (47.00%), Postives = 142/217 (65.44%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            K+N  E A++ A+L D++V DAFG+AHRA  ST GVA+F K + AG L+  EL+ L  A+ NP++P AAIV GSKVSTK+ V+ SL +  D L++GGG+  TF  A G+ VG SL E D +D   ++  K     VS+ LP DVV+A  FA  A + V     + D  M LD+GP     F+E L +++TI+WNGP+GVFEFD+F  GT+ +A+ +A
Sbjct:  119 KKNADELAQRYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVACAGPLLAAELEALGKALDNPQRPMAAIVAGSKVSTKLDVLNSLSQVCDQLIVGGGIANTFLAAAGYKVGKSLYEADLVDTAKAIAAK-----VSVPLPVDVVVAKAFAESAEATVKAIDEVADDDMILDIGPQTAAQFAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAEAIA 330          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK2_HUMAN (Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 PE=1 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48
Identity = 96/214 (44.86%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   35 FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            F   L+ L D+YVNDAFG+AHRAH+S  GV   L    +GFLM+KELDY   A+ NP +PF AI+GG+KV+ KI +I+++L+KV+ +++GGGM +TF K   +  +G+SL +E+   +   +M KA+  GV +  P D V  DKF  +A   K   A+ I  GWMGLD GP++ K+ ++ +   + I+WNGP+GVFE+D FA GT+A+  ++ +
Sbjct:  150 FRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPHKASGFLMKKELDYFAKALENPVRPFLAILGGAKVADKIQLIKNMLDKVNEMIIGGGMAYTFLKVLNNMEIGASLFDEEGAKIVKDIMAKAQKNGVRITFPVDFVTGDKFDENAQVGKATVASGISPGWMGLDCGPESNKNHAQVVAQARLIVWNGPLGVFEWDAFAKGTKALMDEIVK 361          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_HERAR (Phosphoglycerate kinase OS=Herminiimonas arsenicoxydans GN=pgk PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.122e-48
Identity = 99/220 (45.00%), Postives = 141/220 (64.09%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            K+ND   AKK+A+L D+YVNDAFG+AHRA A+T G+AK+   + AG L+  ELD L  A+  P  P  AIV GSKVSTK+ ++++L +KVD L++GGG+  TF  A G  +G SL E D +    ++M+    +G S+ +P DVV A +F+  A + V     + D  M LD+GP      ++ +    TI+WNGP+GVFEFD+FA GT+ +A  +AE S
Sbjct:  124 KKNDDVLAKKIAALCDVYVNDAFGTAHRAEATTHGIAKYATVACAGPLLAAELDALGKALHQPASPLVAIVAGSKVSTKLTILKTLADKVDNLIVGGGIANTFMLAAGLKIGKSLAEADLVGDARAIMDMMAKRGASVPIPVDVVCAKEFSPTAIATVKDVADVTDDDMILDIGPKTADILAKQISQAGTIVWNGPVGVFEFDQFANGTKTLAHAIAESS 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_DESAD (Phosphoglycerate kinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.122e-48
Identity = 97/214 (45.33%), Postives = 141/214 (65.89%), Query Frame = 2
Query:   32 EFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAEL 673
            +F K+LA+LAD+YVNDAFG AHRA+AS   V    K   AGFL++ E +YL  A+ N +KP+ A+ GG+KVS+K+G++ +L+ KVD  ++GG M  TF  AQG +VG SLVEE  +D    +M+KA S G +L LPTD +       +    V    ++P+  M LD+GP++ K F E ++ +KTI+WNGPMG+FE + FA G+  + + +A L
Sbjct:  131 DFGKQLAALADIYVNDAFGVAHRANASVVDVPYAAKECCAGFLLKLEWEYLGEALKNARKPYIAVSGGAKVSSKLGILNNLIGKVDDFIIGGAMANTFLLAQGKAVGKSLVEESLVDTAKEIMDKAASSGTTLHLPTDFIWGKDI--ETAQGVCDGDSVPEDGMLLDIGPESAKKFCEVIERSKTIVWNGPMGLFEKEPFAQGSLKVCEVMANL 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PSEMY (Phosphoglycerate kinase OS=Pseudomonas mendocina (strain ymp) GN=pgk PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 104/218 (47.71%), Postives = 140/218 (64.22%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            K+N  E A++ A+L D++V DAFG+AHRA  ST GVAKF K + AG L+  EL+ L  A+  P +P  AIV GSKVSTK+ V+ SL +  D L++GGG+  TF  A G  VG SL E D +D   ++  K     VS+ LP DVV+A  FA DA + V     + D  M LD+GP   + F+E L  ++TI+WNGP+GVFEFD+F  GT+A+A  +AE
Sbjct:  119 KKNSDELAQQYAALCDVFVMDAFGTAHRAQGSTHGVAKFAKVACAGPLLAAELEALGKALDKPARPMLAIVAGSKVSTKLDVLNSLADICDSLIVGGGIANTFLAAAGLPVGKSLYEADLVDTAKAIAAK-----VSVPLPVDVVVAKAFAEDAEATVKSVKDVADDDMILDIGPQTAQQFAEMLKASQTILWNGPVGVFEFDQFGNGTKALALAIAE 331          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CORGL (Phosphoglycerate kinase OS=Corynebacterium glutamicum GN=pgk PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 98/215 (45.58%), Postives = 140/215 (65.12%), Query Frame = 2
Query:   35 FAKKLASLA---DLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            FA++LA+LA     +V+D FG  HRA  S   +AK L P  AG L++ E+  L     +P+ P+  ++GGSKVS KIGVIE+L  K D +++GGGM +TF  AQGH+V  SL++E+     T L+ +   K   ++LP D+V A +F  DA  ++V   +IP+GWM LD+GP+++K+F E L T KTI WNGPMGVFEF  F+ GT  IA+ + +
Sbjct:  138 FAQELAALAADNGAFVSDGFGVVHRAQTSVYDIAKLL-PHYAGGLVETEISVLEKIAESPEAPYVVVLGGSKVSDKIGVIEALAAKADKIIVGGGMCYTFLAAQGHNVQQSLLQEEMKATCTDLLARFGDK---IVLPVDLVAASEFNKDAEKQIVDLDSIPEGWMSLDIGPESVKNFGEVLSTAKTIFWNGPMGVFEFAAFSEGTRGIAQAIID 348          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_TOLAT1.625e-4846.79Phosphoglycerate kinase OS=Tolumonas auensis (stra... [more]
PGK_TETTH1.625e-4845.79Phosphoglycerate kinase OS=Tetrahymena thermophila... [more]
PGK_CORDI1.625e-4846.98Phosphoglycerate kinase OS=Corynebacterium diphthe... [more]
PGK_CHLMU1.625e-4847.27Phosphoglycerate kinase OS=Chlamydia muridarum GN=... [more]
PGK_AZOVD1.625e-4847.00Phosphoglycerate kinase OS=Azotobacter vinelandii ... [more]
PGK2_HUMAN1.625e-4844.86Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 ... [more]
PGK_HERAR2.122e-4845.00Phosphoglycerate kinase OS=Herminiimonas arsenicox... [more]
PGK_DESAD2.122e-4845.33Phosphoglycerate kinase OS=Desulfovibrio salexigen... [more]
PGK_PSEMY2.772e-4847.71Phosphoglycerate kinase OS=Pseudomonas mendocina (... [more]
PGK_CORGL2.772e-4845.58Phosphoglycerate kinase OS=Corynebacterium glutami... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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