CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.614e-72
Identity = 129/221 (58.37%), Postives = 172/221 (77.83%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE +K  A LAD+YVNDAFG+AHRAHAST G+A +L P+V+GFLMQKEL+ L  A+SNP +PF AI+GG+KV  KIGVIESLL+KVD L++GGG+ +TF KA GH VG SL+EEDK+DL  S M++AK KGV+ L+PTDV++AD F+ DAN+ +VP + IP     LD+G +  + +++ +  +K ++WNGPMGVFE D FA GT+AIA+ LAE
Sbjct:  121 PGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAAYL-PAVSGFLMQKELEVLGKAISNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKVDLAKSFMDRAKEKGVNFLIPTDVLVADDFSNDANTSIVPISEIPSDLEALDIGTETREKYADVIKNSKLVVWNGPMGVFEIDAFAKGTKAIAEALAE 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.614e-72
Identity = 131/221 (59.28%), Postives = 168/221 (76.02%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE AK  A LAD+YVNDAFG+AHRAHASTEG+A  L P+VAGFLM+KE++ L  A+SNP +PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KA GH +G SL+EEDK+DL  S MEKAK KGV+  +P D V+AD F+ DAN KVV    IP  W GLD+GP   + + + +  +K +IWNGPMGVFE D FA GT+A+A+ LA+
Sbjct:  121 PGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTEGIAHHL-PAVAGFLMEKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFVKALGHEIGKSLLEEDKIDLAKSFMEKAKEKGVNFYMPVDAVVADDFSNDANKKVVNIDEIPSDWEGLDIGPKTRELYRDVILKSKLVIWNGPMGVFEMDAFAEGTKAVAQALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.107e-72
Identity = 132/221 (59.73%), Postives = 169/221 (76.47%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE AK  A LAD+YVNDAFG+AHRAHASTEG+A+ + P+VAGFLM+KELD L  A+SNP++PF AIVGG+KV  KIGVI+ LL+KVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK  GV+  +P DVV+AD F+ DAN +VV    IP  W GLD GP   + +++ +  +K +IWNGPMGVFE D FA GT+A+A+ LAE
Sbjct:  121 PGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTEGIAQHI-PAVAGFLMEKELDVLSKALSNPERPFTAIVGGAKVKDKIGVIDHLLDKVDNLIIGGGLSYTFIKALGHEVGKSLLEEDKIELAKSFMEKAKKNGVNFYMPVDVVVADDFSNDANIQVVSIEDIPSDWEGLDAGPKTREIYADVIKNSKLVIWNGPMGVFELDAFANGTKAVAEALAE 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CHLPB (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.695e-72
Identity = 125/221 (56.56%), Postives = 173/221 (78.28%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPEFA++LAS+ ++YVNDAFG+AHRAHASTEG+  +++PSVAGFL++KEL YL  A++NP++PF AI+GG+K+S KI V+E+L  KVD +L+GG MIFTF+KAQG SVG SLVE+DK++L   L++ AK + +++LLP DV+ A +F+ DA +  VP   IP+  MGLD+GP  I +FS  +   KT++WNGPMGVFE + FA GT AIA+ LA+
Sbjct:  122 PEEEKNDPEFARELASMGEIYVNDAFGTAHRAHASTEGICHYVQPSVAGFLIEKELKYLGQALNNPERPFVAILGGAKISGKIDVLENLFNKVDTVLIGGAMIFTFFKAQGLSVGKSLVEDDKVELARHLLQTAKERKINMLLPEDVIAASEFSGDAETMAVPVGGIPENMMGLDIGPKTIDTFSREILAAKTVVWNGPMGVFEIEPFAKGTIAIAQALAD 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.131e-72
Identity = 126/221 (57.01%), Postives = 173/221 (78.28%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPEFA++LAS+ ++YVNDAFG+AHRAHASTEG+  ++  SVAGFL++KEL YL  A++NP++PF AI+GG+K+S KI V+++L +KVD +L+GG MIFTF+KAQG+ VG+SLVEEDK++L   L+EKA +K + +LLP DV+ A  F+ADA +  VP  +IP+  MGLD+GP  I ++S  +   +TI+WNGPMGVFE D FA GT AIA  LA+
Sbjct:  122 PEEEKNDPEFARELASMGEIYVNDAFGTAHRAHASTEGICHYVPISVAGFLIEKELRYLGNALANPERPFLAILGGAKISGKIDVLDNLFDKVDTILIGGAMIFTFFKAQGYQVGTSLVEEDKIELAKHLLEKAAAKNIRMLLPEDVIAASAFSADAETATVPIDSIPETMMGLDIGPKTIDTYSREILKARTIVWNGPMGVFEIDAFATGTIAIAHALAD 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.366e-71
Identity = 127/220 (57.73%), Postives = 175/220 (79.55%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            P  ++NDP FA++LASLAD+YVNDAFG+AHRAHASTEGVA +L P+ AGFL+QKE++ L  A+++P++PF AI+GG+KVS KI VI +LL KVD L++GGGM  TF KAQG+++G SLVEED++ L   L++ A  KGV +LLP D+V+A +F ADA  +VV   A+PDGWM LD+GP+  ++++ AL+  +T++WNGPMGVFE + FA GTEA+A+ +A
Sbjct:  121 PEEEKNDPGFARQLASLADVYVNDAFGAAHRAHASTEGVAHYL-PAAAGFLLQKEIETLGKALADPERPFVAIIGGAKVSDKISVIRNLLTKVDTLIIGGGMANTFLKAQGYAMGKSLVEEDQVPLAQELIQLAAQKGVKMLLPRDLVVAQEFKADAPHQVVAVNAVPDGWMALDIGPETARAYAGALEGARTVVWNGPMGVFEMEAFAHGTEAVARAVA 339          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.366e-71
Identity = 128/221 (57.92%), Postives = 178/221 (80.54%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  + NDP+FA++LASL ++YVNDAFG+AHRAHASTEG+  F++ +VAG+L++KEL YL  A+++ ++PF AI+GG+K+S KI V+ESL EKVD +L+GG M+FTF+KAQG  VG+SLVEE+KL+L  SL+EKAK+K V LLLP DVV+A + +ADA S+V P +AI  G +GLD+GP  I+++ + +   KT++WNGPMGVFE D+FA GT A+A+ LA+
Sbjct:  122 PEEEANDPDFARELASLGEIYVNDAFGTAHRAHASTEGITHFMQTAVAGYLIEKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLVEENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGPMGVFEIDQFARGTFAVAQALAD 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_ROSS1 (Phosphoglycerate kinase OS=Roseiflexus sp. (strain RS-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.043e-71
Identity = 132/220 (60.00%), Postives = 167/220 (75.91%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            PR + ND   A++LA L D+YVNDAFGSAHRAHASTEGVA+FL P+VAGFLM+ EL  L GA+ NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQG+ +G SLVE D + +   L+EKA S+GV  +LPTDVVIAD F+ADAN +VV    IP GW  LD+GP+ +++++E + T +T+IWNGPMGVFE   FA GT AIA+ +A
Sbjct:  123 PREEANDESMARELAKLGDVYVNDAFGSAHRAHASTEGVARFL-PAVAGFLMEAELAALQGALENPTRPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGYEMGDSLVEPDSVPVAKDLLEKAASRGVRFMLPTDVVIADAFSADANRRVVSVGDIPPGWRVLDIGPETVRAYTEIITTAQTVIWNGPMGVFELAPFAEGTRAIAQAMA 341          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 127/221 (57.47%), Postives = 168/221 (76.02%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P  ++NDPE AK  ASLAD+YVNDAFG+AHRAHASTEG+A  +  +VAG LM+KEL+ L  A+SNP++PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KAQGH +G SL+E DK+DL  S MEKAK KGV+  +P D ++AD F+ DAN+K V    IP  W  LD+GP   +++   + ++K +IWNGPMGVFE D FA GT+A+A+ LA+
Sbjct:  121 PGEEKNDPELAKAFASLADVYVNDAFGAAHRAHASTEGIAHHVT-AVAGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEADKMDLALSFMEKAKEKGVNFYVPQDAIVADDFSNDANTKAVDIDQIPADWEALDIGPKTRETYRNVIQSSKLVIWNGPMGVFELDAFAGGTKAVAEALAD 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 8.854e-71
Identity = 127/222 (57.21%), Postives = 170/222 (76.58%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV +F+  SV G+L+QKEL +L  AV NP++PF +I+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++GSSL+EEDK+D    ++EKAK KGV LLLP D V A+KFA DA + +     I +G+MGLD+GP   K +S+ + + KT++WNGPMGVFEF+KFA GT  +AK +AE
Sbjct:  127 RKEETKNEETFSKELASLADIFVNDAFGTAHRAHCSTVGVTEFVATSVCGYLIQKELKFLGNAVENPQRPFISILGGAKVSDKINVINNLLEKVDTLIIGGGMSYTFQKAQGYTIGSSLLEEDKIDYAKEMIEKAKEKGVKLLLPVDNVAAEKFAEDAEAIITEDQNIKEGYMGLDIGPKTSKLYSQEVQSAKTVVWNGPMGVFEFEKFAKGTIEVAKAMAE 348          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACP21.614e-7258.37Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_ANOFW1.614e-7259.28Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_BACME2.107e-7259.73Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]
PGK_CHLPB4.695e-7256.56Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_PROA26.131e-7257.01Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_MOOTA1.366e-7157.73Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_CHLTE1.366e-7157.92Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_ROSS13.043e-7160.00Phosphoglycerate kinase OS=Roseiflexus sp. (strain... [more]
PGK_BACHD5.191e-7157.47Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]
PGK_CLOTE8.854e-7157.21Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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