CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.414e-68
Identity = 127/224 (56.70%), Postives = 163/224 (72.77%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPA-TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            P   +NDPE AK  ASLAD++VNDAFG+AHRAHAS  G+A+F+ PSVAGFLM+KE+ +L     NP+KP+  ++GG+KVS KIGVI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DL   L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ ++ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+
Sbjct:  121 PGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQFI-PSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDTVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALT 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_HERA2 (Phosphoglycerate kinase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pgk PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.414e-68
Identity = 127/223 (56.95%), Postives = 172/223 (77.13%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 676
            PR + NDP  A++LA L D+YVNDAFG+AHRAHASTEG+AKFL P+VAGFLM+ EL  L  A+ +P++PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQ  +VG+SLVE D +     L+++A+ +GV LLLP+DVV+AD F+A+AN++V+    +PDGW  LD+GP+  +++S+ +   KT+IWNGPMGVFE + FAAGT A+A+ LA+ S
Sbjct:  122 PREESNDPAMAEELAKLGDIYVNDAFGAAHRAHASTEGLAKFL-PAVAGFLMEAELAALGKALDDPQRPFVTIIGGAKISDKIGVIENLLGKVDSLLIGGGMANTFLLAQNKAVGASLVEADSVAEAGRLIDEAQGRGVKLLLPSDVVVADAFSAEANTQVLSIDDVPDGWRILDIGPETRQTYSQVVSEAKTVIWNGPMGVFELEPFAAGTRAVAQALADSS 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CHLSY (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.149e-68
Identity = 127/221 (57.47%), Postives = 166/221 (75.11%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            PR + NDP  A +LA L D++VNDAFG+AHRA+ASTEGVA +L P+VAGFLM+KEL Y+ GA++NP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G +VG SLVE D + +   LM +A+ +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE
Sbjct:  124 PREEPNDPAMAAELAKLGDVFVNDAFGTAHRANASTEGVAHYL-PAVAGFLMEKELTYIGGALNNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNVGDSLVEPDSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAE 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CHLAA (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.149e-68
Identity = 127/221 (57.47%), Postives = 166/221 (75.11%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            PR + NDP  A +LA L D++VNDAFG+AHRA+ASTEGVA +L P+VAGFLM+KEL Y+ GA++NP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G +VG SLVE D + +   LM +A+ +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE
Sbjct:  124 PREEPNDPAMAAELAKLGDVFVNDAFGTAHRANASTEGVAHYL-PAVAGFLMEKELTYIGGALNNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNVGDSLVEPDSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAE 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.113e-68
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD 345          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.113e-68
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD 345          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.113e-68
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD 345          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOB6 (Phosphoglycerate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pgk PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.113e-68
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD 345          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.371e-68
Identity = 122/222 (54.95%), Postives = 168/222 (75.68%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  +     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD 345          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.371e-68
Identity = 122/222 (54.95%), Postives = 168/222 (75.68%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N+  F+K+LASLAD++VNDAFG+AHRAH ST GV  +LK +  G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  +     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+
Sbjct:  124 RKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD 345          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THEP11.414e-6856.70Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_HERA21.414e-6856.95Phosphoglycerate kinase OS=Herpetosiphon aurantiac... [more]
PGK_CHLSY3.149e-6857.47Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CHLAA3.149e-6857.47Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CLOBL4.113e-6855.41Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK4.113e-6855.41Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ4.113e-6855.41Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB64.113e-6855.41Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBH5.371e-6854.95Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB15.371e-6854.95Phosphoglycerate kinase OS=Clostridium botulinum (... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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