CX290531

Overview
NameCX290531
Unique NameCX290531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_THELT (Phosphoglycerate kinase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=pgk PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.728e-66
Identity = 124/223 (55.61%), Postives = 158/223 (70.85%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAEL 673
            P  ++ND E AK  A LAD++VNDAFG+AHRAHAS  G+A F+ PSVAGFLM+KE+D+L      P  P+  ++GG+KVS KIGVI +LL K D LL+GG M+FTF KAQG  VGSSLVE DKLDL   ++E+AK K V ++LP D ++A K  A    K       I DGWMGLD+GP  IK F EAL   KT++WNGPMGVFE + FA GT+A+A+ +A++
Sbjct:  122 PGEEKNDQELAKAWAELADIHVNDAFGTAHRAHASNVGIANFI-PSVAGFLMEKEIDFLNKVTYEPDHPYVVVLGGAKVSDKIGVITNLLNKADKLLIGGAMMFTFLKAQGLKVGSSLVENDKLDLAKQILEQAKEKKVEIVLPVDAIVAQKIEAGVEKKTADLKDGIDDGWMGLDIGPKTIKVFEEALKNAKTVVWNGPMGVFEIEDFAGGTKAVAEMIAKI 343          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_THEM4 (Phosphoglycerate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.257e-66
Identity = 123/217 (56.68%), Postives = 160/217 (73.73%), Query Frame = 2
Query:   20 RNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            +NDPE AKK A LAD++VNDAFG+AHRAHAS  G+++++ PSVAGFLM+KE+ +L  A  NP+KP+  I+GG+KVS KIGVI +LL K D +L+GG M+FTF KA G +VGSSLVEEDKLDL   ++E+AK KGV  +LP D V A K  +   +K       IP+GWMGLD+GP++IK F E +   KTI+WNGPMGVFE + F  GT+ +A  +A
Sbjct:  125 KNDPELAKKWADLADIHVNDAFGTAHRAHASNVGISQYI-PSVAGFLMEKEIKFLSKATLNPEKPYVVILGGAKVSDKIGVITNLLNKADKILIGGAMMFTFLKALGKNVGSSLVEEDKLDLAKRILEEAKEKGVEFVLPVDAVCAQKIESGVETKTFRINDGIPEGWMGLDIGPESIKLFKEKISGAKTIVWNGPMGVFEIEDFETGTKEVAISIA 340          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.257e-66
Identity = 119/217 (54.84%), Postives = 162/217 (74.65%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            ++NDPE  +  A++ADLYVNDAFG+AHRAHAST GVA+ L P+ AG LM+KE++ L  A+ NP++PF AIVGG+KV  KI VI++LL+KVD L++GGG+ +TF KAQGH +G SL+EEDK+DL    M KAK KGV+ +LP D ++AD F+ +AN+K+V    IP  W  LD+G    + +S  +  +K +IWNGPMGVFE + FA GT+A+A+ LA
Sbjct:  124 EKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVAEKL-PAAAGKLMEKEIEALGNALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEEDKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMGVFELNAFAGGTKAVAEALA 339          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_EXISA (Phosphoglycerate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.257e-66
Identity = 121/221 (54.75%), Postives = 163/221 (73.76%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            P   +NDPE AK  A+LAD+YVNDAFG+AHRAHASTEG+A  +  +VAG LM+KEL+ L  A+SNP +PF AI+GGSKV+ KIGVI+ LL+ VD L++GGG+ +TF KA GH VG+SL+EEDKLDL    M+KA+ KGV  L+P D VI  +F  +     V   +IP   MGLD+GP  ++ +++A+  +K ++WNGPMGVFE DK+A GT+ +A+ LA+
Sbjct:  121 PGETKNDPELAKGFAALADVYVNDAFGAAHRAHASTEGIAHHVDTAVAGLLMEKELEVLGKALSNPDRPFTAIIGGSKVADKIGVIDHLLDIVDTLIIGGGLSYTFSKALGHEVGTSLLEEDKLDLARQFMKKAEDKGVKFLMPVDCVITKEFGEETYVGPVDIDSIPADHMGLDIGPKTVELYADAIRESKLVVWNGPMGVFELDKYANGTKGVAQALAD 341          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_THEAB (Phosphoglycerate kinase OS=Thermosipho africanus (strain TCF52B) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.849e-66
Identity = 118/218 (54.13%), Postives = 164/218 (75.23%), Query Frame = 2
Query:   20 RNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            +NDPE AKK A LAD++VNDAFG+AHRAHAS  G+A+++ PSVAGFLM+KE+ +L  A +NP+KP+  ++GG+KVS KIGVI +LL+K D +L+GG M+FTF K+ G++VGSSLVE+DKLDL   ++E+AK KG  ++LP D V A K  A   +K +     +P+GWMGLD+GP  ++ F  ++   KTI+WNGPMGVFE + F+ GT+ +A  +AE
Sbjct:  125 KNDPELAKKWAELADIHVNDAFGTAHRAHASNVGIAQYI-PSVAGFLMEKEIKFLSKATTNPEKPYVVVLGGAKVSDKIGVITNLLDKADKILIGGAMMFTFLKSLGYNVGSSLVEDDKLDLAKRILEQAKEKGTEIVLPVDTVCAQKIEAGVETKTIDIKDGLPEGWMGLDIGPKTVELFRNSISGAKTIVWNGPMGVFEIEDFSNGTKEVAIAIAE 341          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.566e-66
Identity = 129/219 (58.90%), Postives = 160/219 (73.06%), Query Frame = 2
Query:   17 KRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAEL 673
            ++ND     KLA L D +V DAFGSAHRAH+S  GVA  L P  AG L+Q E+D L   +  P+ P+  I+GG+KVS KI VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D+LDL   L+EK   K   LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVFEFD+FAAGT A+A  +  L
Sbjct:  145 EKNDAALNDKLAKLGDAFVLDAFGSAHRAHSSVSGVAGKL-PHAAGGLLQSEVDALGKLLHAPEHPYVVIIGGAKVSDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGQIGNSLVEDDQLDLAKGLLEKYGDK---LLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVFEFDQFAAGTNAVAAAVGSL 359          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_FINM2 (Phosphoglycerate kinase OS=Finegoldia magna (strain ATCC 29328) GN=pgk PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.576e-66
Identity = 122/222 (54.95%), Postives = 163/222 (73.42%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R   ++ND  F+K+L+ LADLYVNDAFG++HRAHAS  GV+KFL PS  GFL+QKE++ +  A+ NP++PF AI+GG+KVS KIGVIE+LL+KVD +L+GG M FTF K+QG +VG SL+EEDKLDL  SL+EKA+ KGV + LP D V+A +   +++SKV+      D   G D+G   IK F E +  +KTI+WNGPMGVFE ++F+ GT  IA  L +
Sbjct:  122 RKEEEKNDQTFSKELSQLADLYVNDAFGTSHRAHASNVGVSKFL-PSAVGFLVQKEIEIMGKALENPERPFTAILGGAKVSDKIGVIENLLDKVDTILIGGAMAFTFIKSQGKNVGKSLIEEDKLDLAKSLLEKAQEKGVKIFLPVDFVVAKEMTEESDSKVINIDDFTDDIAGFDIGTKTIKIFDEEIQKSKTIVWNGPMGVFEIEQFSKGTFEIANSLVK 342          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.463e-65
Identity = 119/220 (54.09%), Postives = 166/220 (75.45%), Query Frame = 2
Query:    8 PRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLA 667
            P  + NDPEFAK+LA+L ++YVNDAFG+AHRAHASTEG+  F+  +VAG+L++KEL YL  A+  P++PF AI+GGSK+S KI V+E+L +KVD +L+GG M+FTF+KA G   GSSLVE++KL+L  SL+E+AK++ + LLLP DV+ A + +ADA    V    +  G MGLD+GP  I+++ + +   +TI+WNGPMGVFE D FA GT A+A+ +A
Sbjct:  122 PEEEANDPEFAKELAALGEMYVNDAFGTAHRAHASTEGITHFVPTAVAGYLIEKELMYLGKALEKPERPFVAILGGSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAMGLETGSSLVEDNKLELALSLLEQAKNRNIKLLLPQDVIAAPELSADAPFHAVSVKELEAGEMGLDIGPLTIEAYRQEILGARTILWNGPMGVFEIDSFANGTFAVAEAMA 341          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 123/222 (55.41%), Postives = 164/222 (73.87%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N  E +K+LASLA+++VNDAFG+AHRAH ST GV ++LKP+V G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++    ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE
Sbjct:  124 RKEETKNGEELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAE 344          
BLAST of CX290531 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 123/222 (55.41%), Postives = 164/222 (73.87%), Query Frame = 2
Query:    5 RPRRKRNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAE 670
            R    +N  E +K+LASLA+++VNDAFG+AHRAH ST GV ++LKP+V G+L+QKEL +L  AV  P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++    ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE
Sbjct:  124 RKEETKNGEELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAE 344          
The following BLAST results are available for this feature:
BLAST of CX290531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THELT1.728e-6655.61Phosphoglycerate kinase OS=Thermotoga lettingae (s... [more]
PGK_THEM42.257e-6656.68Phosphoglycerate kinase OS=Thermosipho melanesiens... [more]
PGK_OCEIH2.257e-6654.84Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_EXISA2.257e-6654.75Phosphoglycerate kinase OS=Exiguobacterium sp. (st... [more]
PGK_THEAB3.849e-6654.13Phosphoglycerate kinase OS=Thermosipho africanus (... [more]
PGK_DEIRA6.566e-6658.90Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_FINM28.576e-6654.95Phosphoglycerate kinase OS=Finegoldia magna (strai... [more]
PGK_PROVI1.463e-6554.09Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_CLOPS1.910e-6555.41Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOPE1.910e-6555.41Phosphoglycerate kinase OS=Clostridium perfringens... [more]

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Properties
Property NameValue
Genbank descriptionC02025B11SK IF1 Citrus clementina cDNA clone C02025B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290531 ID=CX290531; Name=CX290531; organism=Citrus clementina; type=EST; length=677bp
GATTCGGCCGAGGAGGAAGAGAAATGACCCAGAGTTTGCTAAGAAGCTAG
CTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGA
GCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGC
TGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAA
ATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACT
AAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACATTCTATTGCT
CGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGACACTCTGTTG
GTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGGTACGTCACTTATG
GAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGT
TATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAA
CGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATC
AAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCATCTGGAATGG
ACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAA
TTGCCAAGAAGCTTGCGGAGCTCAGCG
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