CX290533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_SCHPO (RuvB-like helicase 2 OS=Schizosaccharomyces pombe GN=rvb2 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.731e-51 Identity = 107/224 (47.77%), Postives = 152/224 (67.86%), Query Frame = 2 Query: 23 LDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESLAHL 688 L + D+L KEKV GDVI I+ + G V ++GRS + A ++D + +V P+GE+ K+KE+V V+LHD+D N+R QG + S +KP ++R++IN V+ + +EG AE+VPGVLF+DEVHMLD+ECFS+ NRALE L+PIVI A+NRGI IRGT+ SPHGIP+DLLDR++II T Y E+ +IL IR Q E++ ++ +L +L Sbjct: 168 LGTKMIDSLTKEKVLAGDVISIDKSVGRVTKLGRSFSRARDYDAMGADTRFVQCPQGEIQKRKEVVHTVSLHDIDVINSRTQGFLALFSGDTGEIKP-------EVREQINTKVSEWREEGKAEIVPGVLFVDEVHMLDIECFSFFNRALEDDLAPIVIMASNRGITRIRGTNYRSPHGIPVDLLDRMLIISTLPYSHEEVKEILKIRCQEEDVDMEPSALDYL 384
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_DROPS (RuvB-like helicase 2 OS=Drosophila pseudoobscura pseudoobscura GN=rept PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.180e-51 Identity = 106/220 (48.18%), Postives = 146/220 (66.36%), Query Frame = 2 Query: 35 IYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESLAHL 688 I + +KEK+ GDVI I+ SG V ++GRS A ++D + +V P+GE+ K+KE+V VTLH++D N+R G + S EI ++R +IN V + +EG AE+ PGVLFIDEVHMLD+ECFSYLNRALES ++P+V+ ATNRGI IRGT+ SPHGIP+DLLDR++IIRT Y E+ +IL IR + E+ V+ ++L L Sbjct: 174 IIECFMKEKIQAGDVITIDKASGKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALFS-------GDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSYLNRALESDMAPVVVMATNRGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCVMHPDALTIL 386
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_DROME (RuvB-like helicase 2 OS=Drosophila melanogaster GN=rept PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50 Identity = 104/220 (47.27%), Postives = 146/220 (66.36%), Query Frame = 2 Query: 35 IYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESLAHL 688 I + +KEK+ GDVI I+ SG V ++GRS A ++D + +V P+GE+ K+KE+V VTLH++D N+R G + S EI ++R +IN V + +EG AE+ PGVLFIDEVHMLD+ECFS+LNRALES ++P+V+ ATNRGI IRGT+ SPHGIP+DLLDR++IIRT Y E+ +IL IR + E+ ++ ++L L Sbjct: 174 IIECFMKEKIQAGDVITIDKASGKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALFS-------GDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMAPVVVMATNRGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIMHPDALTIL 386
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_CANAL (RuvB-like helicase 2 OS=Candida albicans GN=RVB2 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.005e-50 Identity = 108/225 (48.00%), Postives = 146/225 (64.89%), Query Frame = 2 Query: 20 KLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESLAHL 688 +L + + L KEKV GDVI I+ SG + ++GRS A ++D E +V P+GE+ K+KE+V ++LH++D N+R QG + S EI ++R +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS++NRALE SPIVI ATNRG+ IRGTD SPHG+P+DLLDR + I T Y E+ IL+IRA EE+ L ++LA L Sbjct: 174 ELGNKMIEGLTKEKVLAGDVISIDKASGKITKLGRSFTRARDYDAMGPETKFVQCPEGELQKRKEVVHTISLHEIDVINSRQQGFLALFS-------GDTGEIRPEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFSPIVIMATNRGVSRIRGTDYKSPHGMPMDLLDRSITIHTTSYTADEIRTILSIRATEEEVELSGDALALL 391
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_XENLA (RuvB-like 2 OS=Xenopus laevis GN=ruvbl2 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.231e-50 Identity = 106/224 (47.32%), Postives = 148/224 (66.07%), Query Frame = 2 Query: 32 TIYD-------ALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEES 676 TIYD +L KEKV GDVI I+ +G + ++GR+ A ++D + +V P GE+ K+KE+V V+LH++D N+R QG + S EI ++R++IN V + +EG AE++PGVLFIDEVHMLD+ECFS+LNRALES ++P++I ATNRGI IRGT+ SPHGIP+DLLDRL+II T Y E QIL IR + E++ + E++ Sbjct: 169 TIYDLGTKMIESLTKEKVQAGDVITIDKATGKITKLGRAFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRALESDMAPVLIMATNRGITRIRGTNYQSPHGIPIDLLDRLLIISTSPYNEKETKQILKIRCEEEDVDMSEDA 385
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_AEDAE (RuvB-like helicase 2 OS=Aedes aegypti GN=rept PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.231e-50 Identity = 105/217 (48.39%), Postives = 145/217 (66.82%), Query Frame = 2 Query: 35 IYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 I + +KEK+ GDVI I+ SG V ++GRS A ++D + +V P+GE+ K+KE+V VTLH++D N+R G L+L EI ++R +IN V + +EG AE+ PGVLFIDE HMLD+ECFS+LNRALES ++P+VI ATNRGI IRGT+ SPHGIP+DLLDR++IIRT Y E+ +IL IR + E+ ++ E+L Sbjct: 174 IIECFMKEKIQAGDVITIDKASGKVSKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHG---FLALFAG----DTGEIKQEVRDQINSKVMEWREEGKAEINPGVLFIDEAHMLDIECFSFLNRALESDMAPVVIMATNRGITKIRGTNYRSPHGIPIDLLDRMIIIRTVPYSAKEIKEILKIRCEEEDCQINNEAL 383
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_YEAST (RuvB-like protein 2 OS=Saccharomyces cerevisiae GN=RVB2 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.522e-49 Identity = 106/222 (47.75%), Postives = 147/222 (66.22%), Query Frame = 2 Query: 20 KLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 +L + D L KEKV GDVI I+ SG + ++GRS A + ++D + +V P+GE+ K+K +V V+LH++D N+R QG L+L EI ++R +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS++NRALE +PIV+ ATNRG+ RGT+ SPHG+PLDLLDR +II T+ Y E+ IL+IRAQ EE+ L ++L Sbjct: 170 ELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG---FLALF----TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDAL 384
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_ASHGO (RuvB-like helicase 2 OS=Ashbya gossypii GN=RVB2 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.988e-49 Identity = 108/222 (48.65%), Postives = 146/222 (65.77%), Query Frame = 2 Query: 20 KLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 +L + D L KEKV GDVI I+ G + ++GRS A + ++D + +V P+GE+ K+K +V V+LH++D N+R QG L+L EI + R +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS++NRALE +PIVI ATNRGI RGT+ SPHG+PLDLLDR +II TQ Y E+ IL+IR+Q EE+ L E++L Sbjct: 169 ELGNKMIDGLTKEKVLAGDVISIDKACGKITKLGRSFARSRDYDAMGPDTKFVQCPEGELQKRKSVVHTVSLHEIDVINSRTQG---FLALF----TGDTGEIRSEDRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTQNYSEQEIKTILSIRSQEEEVELTEDAL 383
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_DEBHA (RuvB-like helicase 2 OS=Debaryomyces hansenii GN=RVB2 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.429e-49 Identity = 107/225 (47.56%), Postives = 145/225 (64.44%), Query Frame = 2 Query: 20 KLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESLAHL 688 +L + + L KEKV GDVI I+ SG + ++G+S A ++D E +V P+GE+ K+KE+V V+LH++D N+R QG + S EI ++R +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS++NRALE +PIVI ATNRGI RGT+ SPHG+P+DLLDR +II T Y E+ IL IRA EE+ L ++LA L Sbjct: 171 ELGNKMIEGLTKEKVLAGDVISIDKASGKITKLGKSFTRARDYDAMGPETKFVQCPEGELQKRKEVVHTVSLHEIDVINSRQQGFLALFS-------GDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDDFAPIVIMATNRGISKTRGTNYKSPHGLPMDLLDRSIIIHTAPYNADEIRTILLIRATEEEVELTGDALALL 388
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_CANGA (RuvB-like helicase 2 OS=Candida glabrata GN=RVB2 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.784e-49 Identity = 106/222 (47.75%), Postives = 145/222 (65.32%), Query Frame = 2 Query: 20 KLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 +L + D L KEKV GDVI I+ SG + ++GRS A + ++D + +V P+GE+ K+K +V V+LH++D N+R QG L+L EI ++R +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS++NRALE +PI++ ATNRGI RGT+ SPHG+PLDLLDR +II T Y E+ IL IRAQ EE+ L ++L Sbjct: 171 ELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGYDTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG---FLALF----TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIIMMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTSNYNEEEIKTILTIRAQEEEVELSPDAL 385 The following BLAST results are available for this feature:
BLAST of CX290533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290533 ID=CX290533; Name=CX290533; organism=Citrus clementina; type=EST; length=688bpback to top |