CX290533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_KLULA (RuvB-like helicase 2 OS=Kluyveromyces lactis GN=RVB2 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.289e-48 Identity = 106/222 (47.75%), Postives = 146/222 (65.77%), Query Frame = 2 Query: 20 KLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 +L + + L KEKV GDVI I+ SG + ++GRS A + ++D + +V P+GE+ K+K +V V+LH++D N+R QG L+L EI ++R +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS++NRALE +PIVI ATNRGI RGT+ SPHG+PLDLLDR +II T+ Y +E+ IL IR+ EE+ L E+L Sbjct: 168 ELGNKMIEGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG---FLALF----TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIRSTEEEVELSPEAL 382
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_MOUSE (RuvB-like 2 OS=Mus musculus GN=Ruvbl2 PE=2 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 1.683e-48 Identity = 103/224 (45.98%), Postives = 146/224 (65.18%), Query Frame = 2 Query: 32 TIYD-------ALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEES 676 TIYD +L K+KV GDVI I+ +G + ++GRS A ++D + +V P GE+ K+KE+V V+LH++D N+R QG + S EI ++R++IN V + +EG AE++PGVLFIDEVHMLD+E FS+LNRALES ++P++I ATNRGI IRGT SPHGIP+DLLDRL+I+ T Y + QIL IR + E++ + E++ Sbjct: 170 TIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTSPYSEKDTKQILRIRCEEEDVEMSEDA 386
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_BOVIN (RuvB-like 2 OS=Bos taurus GN=RUVBL2 PE=2 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 1.683e-48 Identity = 103/224 (45.98%), Postives = 146/224 (65.18%), Query Frame = 2 Query: 32 TIYD-------ALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEES 676 TIYD +L K+KV GDVI I+ +G + ++GRS A ++D + +V P GE+ K+KE+V V+LH++D N+R QG + S EI ++R++IN V + +EG AE++PGVLFIDEVHMLD+E FS+LNRALES ++P++I ATNRGI IRGT SPHGIP+DLLDRL+I+ T Y + QIL IR + E++ + E++ Sbjct: 170 TIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTSPYSEKDKKQILRIRCEEEDVEMSEDA 386
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_HUMAN (RuvB-like 2 OS=Homo sapiens GN=RUVBL2 PE=1 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 2.198e-48 Identity = 103/224 (45.98%), Postives = 146/224 (65.18%), Query Frame = 2 Query: 32 TIYD-------ALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEES 676 TIYD +L K+KV GDVI I+ +G + ++GRS A ++D + +V P GE+ K+KE+V V+LH++D N+R QG + S EI ++R++IN V + +EG AE++PGVLFIDEVHMLD+E FS+LNRALES ++P++I ATNRGI IRGT SPHGIP+DLLDRL+I+ T Y + QIL IR + E++ + E++ Sbjct: 170 TIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDA 386
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_DICDI (RuvB-like helicase 2 OS=Dictyostelium discoideum GN=rvb2 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.395e-48 Identity = 100/221 (45.25%), Postives = 149/221 (67.42%), Query Frame = 2 Query: 23 LDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 L + D+L KEKV GD+I I+ +G + ++GRS + + ++ + ++ P+GE+ +++ V+LH++D N+R QG + + G + EI ++R++IN+ V + +EG AE+VPGVLFIDEVHMLD+ECFSYLNRALE +SPI+I ATNRG IRGTD +PHGIPLDLLDRL+II TQ Y ++ +IL IR + E++ + E++L Sbjct: 170 LGAKMIDSLTKEKVQNGDIIRIDKGTGKITKLGRSLSRVRDHEISGSKVNFIECPEGEIQQRRTETHTVSLHEIDVINSRAQGFFALFA--GDI-----GEIKSEVREQINQKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSYLNRALEDDMSPILIIATNRGNTTIRGTDYKAPHGIPLDLLDRLLIINTQPYTEKDIYKILKIRCEEEDVDIQEDAL 383
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_CRYNE (RuvB-like helicase 2 OS=Cryptococcus neoformans GN=RVB2 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.352e-48 Identity = 105/221 (47.51%), Postives = 144/221 (65.16%), Query Frame = 2 Query: 23 LDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESL 679 L + D L KEKV GDV+ I+ SG + ++GRS A ++D + +V P GE+ +KE+V V+LH++D N+R QG L+L EI +LR +IN V + +EG AE+VPGVLFIDEVHMLD+ECFS+LNRA+E+ L+P+V+ A+NRGI IRGT SPHGIP DLLDR++II T Y EM +I+ IRA+ E++ L +L Sbjct: 172 LGSKMIDQLQKEKVLAGDVVSIDKASGRISKLGRSFGRAKDYDAMGADTRFVACPDGELQTRKEVVHTVSLHEIDVINSRTQG---FLALFAG----DTGEIKPELRAQINGKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRAMENELAPLVVMASNRGITRIRGTKYKSPHGIPADLLDRMLIISTNRYEEDEMREIVKIRAEEEDVRLSPAAL 385
BLAST of CX290533 vs. ExPASy Swiss-Prot
Match: RUVB2_ENCCU (RuvB-like helicase 2 OS=Encephalitozoon cuniculi GN=RVB2 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37 Identity = 88/219 (40.18%), Postives = 134/219 (61.19%), Query Frame = 2 Query: 47 LIKEKVAVGDVIYIEANSGAVKRVG-----RSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRFIDEGAAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNIRGTDMNSPHGIPLDLLDRLVIIRTQIYGPAEMIQILAIRAQVEEIVLDEESLAHL 688 L KEKV+ GDVI I G V ++G RSD T+ +VP P+GE+ + E Q+++LHD+D N++ +G + S EI + R E+NK V +I+EG AE+V GVLFIDEVHMLD+E F++LN+A+E P+++ +TN+G C +RGTD SP+GIP D +DR +II + + ++ IL R E+I++D++++ L Sbjct: 158 LDKEKVSAGDVIRIVRERGRVYKIGTSMVKRSDVVGTD-----TRFVPCPEGELIRITEETQEISLHDIDVVNSKAEGYLALFS-------GETGEIRAETRDEVNKKVWGWINEGKAEIVRGVLFIDEVHMLDIESFAFLNKAVEEDFCPVILVSTNKGECIVRGTDEPSPYGIPRDFIDRALIISMEKHCRRDLEAILRHRILEEDILIDDDAVDRL 364 The following BLAST results are available for this feature:
BLAST of CX290533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290533 ID=CX290533; Name=CX290533; organism=Citrus clementina; type=EST; length=688bpback to top |