CX290548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13 Identity = 54/187 (28.88%), Postives = 90/187 (48.13%), Query Frame = 3 Query: 42 NISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHD-VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST 599 NI +++++ G + LW GNG+N+++I P A++ +E K+ T+ K E + G L+ + + + I +P+EVLK RL V Y + KI ++ GI AFY G P ++G++PY+ +YETLK + + K S N ++ LG G +ST Sbjct: 232 NIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAE--RFIAGSLAGATAQTSI------------------YPMEVLKTRLAVGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNYAKDSANPGVLVLLG--CGTVSST 396
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13 Identity = 49/180 (27.22%), Postives = 87/180 (48.33%), Query Frame = 3 Query: 75 QQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS-HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 611 + G+ LW GN M+R+IP AI+ E K + + + P V P L+ SL+ + + + +PL++++ R+ V+ ++Y ++ +I +E G+ Y G +PT++G++PY+ +F YETLKK + + E L GA AG + S+P Sbjct: 85 KDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYK-GILGKYYGFQGKALPPV---PRLLAGSLAGTT------------AAIITYPLDMVRARMAVTPKEMYSNIMDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKTHAEKTGRAHPFPYERLVFGACAGLIGQSASYP 248
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.554e-12 Identity = 58/198 (29.29%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 66 VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK---KYCNS-KNKRSLNRPEMLAL--------GALAGFTASTISFP 611 V +++G+ GL+ GNG M+RI P AI+ FE K +TT + ++ G ++ S++ + + +PL+V++ RL Y + A IY KEGG FY G+ PT++GM PY++ +F + TLK Y + + S + P +L L G +A A TIS+P Sbjct: 83 VPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITT--KLGVSGHVHRLMAGSMAGKMSMT---------------AVICTYPLDVVRVRLAFQVKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVARAIAQTISYP 263
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12 Identity = 48/186 (25.81%), Postives = 86/186 (46.24%), Query Frame = 3 Query: 78 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTT-------AQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS-HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 611 +G+ LW GN M+R++P AI+ E KR + + A W P++ G L+ + + S +PL++++ R+ V+ ++Y ++ +I +E G+ Y G PT++G++PY+ +F YETLK + +R E + GA AG + S+P Sbjct: 84 EGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGSYYGFRGEALPPW-----PRLFAGALAGTTAAS------------------LTYPLDLVRARMAVTPKEMYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYPFERMIFGACAGLIGQSASYP 246
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12 Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 66 VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK---KYCNS-KNKRSLNRPEMLAL--------GALAGFTASTISFP 611 V +++G+ GL+ GNG M+RI P AI+ FE K +TT + ++ G ++ + + +PL+V++ RL Y + A IY KEGG FY G+ PT++GM PY+ +F + TLK Y + + S + P +L L G +AG A TIS+P Sbjct: 83 VPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITT--KLGVSGHVHRLMAGSMA------------------GMTAVICTYPLDVVRVRLAFQVKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYP 260
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12 Identity = 52/187 (27.81%), Postives = 88/187 (47.06%), Query Frame = 3 Query: 42 NISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHD-VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST 599 NI +++++ G + LW GNG+N+++I P A++ +E K+ T+ K E + G L+ + + + I +P+EVLK RL V Y + KI + G+ AFY G P ++G++PY+ +YETLK + + S N ++ LG G +ST Sbjct: 232 NIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAE--RFIAGSLAGATAQTSI------------------YPMEVLKTRLAVGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLG--CGTASST 396
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11 Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 66 VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK---KYCNS-KNKRSLNRPEMLAL--------GALAGFTASTISFP 611 V +++G+ GL+ GNG M+RI P AI+ FE K +TT + ++ G ++ + + +PL++++ RL Y + A IY KEGG FY G+ PT++GM PY+ +F + TLK Y + + S + P +L L G +AG A TIS+P Sbjct: 81 VPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITT--KLGVSGHVHRLMAGSMA------------------GMTAVICTYPLDMVRVRLAFQVKGEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYP 258
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11 Identity = 56/198 (28.28%), Postives = 85/198 (42.93%), Query Frame = 3 Query: 66 VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSK----NKRSLNRPEMLAL--------GALAGFTASTISFP 611 V +++G+ GL+ GNG M+RI P AI+ FE K +TT +S + + +PL++++ RL Y + A IY KEGG FY G+ PT++GM PY+ +F + TLK + + S + P +L L G +AG A TIS+P Sbjct: 83 VPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITT--------------------KLGISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYP 260
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: S2541_HUMAN (Solute carrier family 25 member 41 OS=Homo sapiens GN=SLC25A41 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 54/187 (28.88%), Postives = 88/187 (47.06%), Query Frame = 3 Query: 42 NISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSH-DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST 599 N+ G ++++ G++ LW GNGIN+L+I P AI+ FE K Q +E ++ G L+++ S + I +P+EVLK RLT+ Y L +I + G A Y G P ++G++PY+ +YE L+ + K+ R + P L +L+ T ST Sbjct: 131 NLLGGLQSMVQEGGFRSLWRGNGINVLKIAPEYAIKFSVFEQCKNYFCGIQGSPPFQE--RLLAGSLAVAISQTLI------------------NPMEVLKTRLTLRRTGQYKGLLDCARQILQREGTRALYRGYLPNMLGIIPYACTDLAVYEMLQCFWV--KSGRDMGDPS--GLVSLSSVTLST 293
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: S2541_BOVIN (Solute carrier family 25 member 41 OS=Bos taurus GN=SLC25A41 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 42 NISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSH-DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST 599 N+ G +I++ G + LW GNGIN+L+I P AI+ FE K E +E ++ G L+++ S + I +P+EVLK RLT+ Y L +I ++ G A Y G P ++G++PY+ +YE L + K+ R + P L +L+ T ST Sbjct: 129 NLLGGLRSLIQEGGIRSLWRGNGINVLKIAPEYAIKFSVFEQCKNYFCGVHESPPFQE--RLLAGSLAVATSQTLI------------------NPMEVLKTRLTLRRTGQYKGLLDCARQILEQEGTRALYRGYLPNMLGIIPYACTDLAVYEMLNCLWL--KSGRDMKDPS--GLVSLSSVTLST 291 The following BLAST results are available for this feature:
BLAST of CX290548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290548 ID=CX290548; Name=CX290548; organism=Citrus clementina; type=EST; length=611bpback to top |