CX290548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: YBT5_SCHPO (Uncharacterized mitochondrial carrier C12D12.05c OS=Schizosaccharomyces pombe GN=SPBC12D12.05c PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11 Identity = 52/193 (26.94%), Postives = 88/193 (45.60%), Query Frame = 3 Query: 75 QQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS------HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPE--------MLALGALAGFTASTISFP 611 + G + + GNGIN+L+++P +I+ GT+E +KR + + + G ++ S + +I +P++ LK R+ S H LS A ++YK GI +Y G+ ++GM PYS +E LK+ + R P+ ++A GAL+G T +TI FP Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVLGISSSSENHSPLYSYLAGGMAGSVAQMFI------------------YPVDTLKFRIQCSDLSRGQHGKSIILSNA-KELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFP 355
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: S2542_RAT (Solute carrier family 25 member 42 OS=Rattus norvegicus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11 Identity = 47/186 (25.27%), Postives = 85/186 (45.70%), Query Frame = 3 Query: 78 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAM-------TTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS-HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 611 +G+ LW GN M+R+IP AI+ E KR + A W P++ G L+ + + S +PL++++ R+ V+ ++Y ++ +I +E G+ Y G +PT++G++PY+ +F YE+LK + + E + GA AG + S+P Sbjct: 84 EGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPW-----PRLLAGALAGTTAAS------------------LTYPLDLVRARMAVTPKEMYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKSLHREYSGRPQPYPFERMVFGACAGLIGQSASYP 246
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: S2542_MOUSE (Solute carrier family 25 member 42 OS=Mus musculus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11 Identity = 47/186 (25.27%), Postives = 85/186 (45.70%), Query Frame = 3 Query: 78 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAM-------TTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS-HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 611 +G+ LW GN M+R+IP AI+ E KR + A W P++ G L+ + + S +PL++++ R+ V+ ++Y ++ +I +E G+ Y G +PT++G++PY+ +F YE+LK + + E + GA AG + S+P Sbjct: 84 EGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPW-----PRLLAGALAGTTAAS------------------LTYPLDLVRARMAVTPKEMYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKSLHREYSGRPQPYPFERMVFGACAGLIGQSASYP 246
BLAST of CX290548 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 45/180 (25.00%), Postives = 83/180 (46.11%), Query Frame = 3 Query: 78 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS--HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 611 +G+ G + GNG N++RI P AI+ ++E K + ++ + +G + SL L +PL++++ RLTV + Y ++ I +E G+ Y G+ + +G+ PY + YE LKK + ++ + L GA++G TA T+++P Sbjct: 196 EGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSL------------------LCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFIPKDTTPTV--VQSLTFGAISGATAQTLTYP 355 The following BLAST results are available for this feature:
BLAST of CX290548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290548 ID=CX290548; Name=CX290548; organism=Citrus clementina; type=EST; length=611bpback to top |