CX290552

Overview
NameCX290552
Unique NameCX290552
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: FET3_KLULA (Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis GN=FET3 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11
Identity = 55/192 (28.65%), Postives = 78/192 (40.62%), Query Frame = 2 
Query:   86 NTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGR--------GEGK--FTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPTRR 631
            N  NG      NN++   P  P L +     KDA                + P V    T     ++L  +  ++++L N      N +  HP+HLHGH F ++ R        GEG   F  ED             T  + P     LRF ADNPG W FHCHIE H   G+ ++L    E + N  +++
Sbjct:  352 NLKNGVNYAFFNNLTFTAPKVPTLMTALSAGKDA----------------LNPLVYGTNT---NAFVLKKDEIIEIVLNN------NDTGKHPFHLHGHIFQLVDRERGYDDAIGEGPHPFDPEDHNPFPDYPMMRD-TVYVNPQSSIVLRFKADNPGVWFFHCHIEWHLKQGLALLLIEAPEEMQNTESQQ 517
The following BLAST results are available for this feature:
BLAST of CX290552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
FET3_KLULA4.268e-1128.65Iron transport multicopper oxidase FET3 OS=Kluyver... [more]

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Properties
Property NameValue
Genbank descriptionC02025D10SK IF1 Citrus clementina cDNA clone C02025D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290552 ID=CX290552; Name=CX290552; organism=Citrus clementina; type=EST; length=647bp
CATTCTCCACAAAATATTTGCCCTAATGGGATCCCCCAAGCCTCCCACAA
ATTTCCACCGTCGGCTCACCCTTCTTAACACTCAAAACACCATTAACGGG
TTCACTAAGTGGGCTATTAACAATGTGTCCCTGAATTTACCCCCCACTCC
TTACTTAGGATCCATCAAATATGGTCTTAAAGATGCTTTTGATCAGAATG
GTCCCCCCGAAAACTTCTCGAATGAGTATGACGTGATGAAACCTCCTGTA
AACGCTAATACAACTCTTGGAAGTGGGGTTTACATGCTTGGTTTAAACAC
CACAGTTGATGTTATACTTCAAAATGCAAACGCGATAAGGCCAAACTTGA
GTGAAACCCACCCTTGGCATTTGCATGGGCATGATTTTTGGGTATTAGGG
CGCGGAGAAGGGAAGTTTACGAAAGAAGATGAGAAGAAATTTAACTTGAA
GAATCCACCATTGAAAAATACTGCGGTGATATTCCCATATGGCTGGACTG
CTTTAAGATTTGTTGCTGATAATCCAGGTGCTTGGGCATTTCACTGCCAT
ATTGAGCCCCATTTCCATATTGGAATGGGTGTGGTTCTTGCTCTTGGTGT
TGAAACCGTTGGTAATATTCCAACCAGGCGTTGGCTTGTGGTTTGAC
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